Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78048 | Canola | mitochondrion, nucleus | 61.31 | 88.84 |
| CDX73674 | Canola | mitochondrion, nucleus | 55.9 | 81.77 |
| AT3G51940.2 | Thale cress | mitochondrion, nucleus | 26.72 | 35.67 |
| KRH62921 | Soybean | nucleus | 12.62 | 21.69 |
| Bra009495.1-P | Field mustard | plastid | 11.8 | 21.62 |
| KRH29960 | Soybean | nucleus | 11.15 | 18.73 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 12.13 | 18.64 |
| Solyc01g068170.2.1 | Tomato | nucleus | 11.31 | 16.35 |
| PGSC0003DMT400017586 | Potato | nucleus | 12.79 | 12.6 |
| Zm00001d044509_P001 | Maize | nucleus | 3.61 | 9.4 |
Protein Annotations
Description
AT3G51940 (E=2e-135) | unknown protein
Coordinates
chrA09:-:25997545..26003354
Molecular Weight (calculated)
69861.3 Da
IEP (calculated)
6.654
GRAVY (calculated)
-0.970
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSHRKYNSS LSSSSNRRPG VRHSTFESLR LGRSSQSIAS GFLRFWDSLN FKKDREFVGI TVLFLDENVN MVGKIHSFQG SDLTKETTRV VIRLLIDPGN
101: ASSASQITQL TSWVDTPHFT ITRGQKNSIS SIDPPIFPIH HRLRIRLINA DVFEHGPKYI EAASDFGAFP IRSVVSSSQI SPAARRSQPF FCSRNINRHP
201: FEASRWESGT IGPDSTVADL LRDGYGEDDG IPVWEKRFCE MIGSVPWRKV VEATNFKSWY TGNVITWDDS ACQETFHNEK KRFWSQVNGV HCDISLPDPD
301: LYVSDVDWDT TVDPELISDL EGAYFAPPDD EVKSGLKRGR RDMSWSGCSN LVPIEEARML KIPWECSEEV RDVDGSVKKG NGWNVAESSS DHPSDRTRPW
401: EAKPSFGNEK ANDTMSGDCL WKEIEWKTED KGNDRWGQGN DGWEQSGQQN KKAKGSESVP AREDEMLDNP WEAKLSCRKE TAEDTTWGGW SGKGWDDRGC
501: GSGGWEKRDM EMNEWRRTRC SQDYREPRSY NPWKAGFGPD NTARREYGAN AGGWQTRRVS ETNRREWDVK RSSDGWGRRN RERDESYGYN SNYRNSRPIR
601: DDYQNRKVNF
101: ASSASQITQL TSWVDTPHFT ITRGQKNSIS SIDPPIFPIH HRLRIRLINA DVFEHGPKYI EAASDFGAFP IRSVVSSSQI SPAARRSQPF FCSRNINRHP
201: FEASRWESGT IGPDSTVADL LRDGYGEDDG IPVWEKRFCE MIGSVPWRKV VEATNFKSWY TGNVITWDDS ACQETFHNEK KRFWSQVNGV HCDISLPDPD
301: LYVSDVDWDT TVDPELISDL EGAYFAPPDD EVKSGLKRGR RDMSWSGCSN LVPIEEARML KIPWECSEEV RDVDGSVKKG NGWNVAESSS DHPSDRTRPW
401: EAKPSFGNEK ANDTMSGDCL WKEIEWKTED KGNDRWGQGN DGWEQSGQQN KKAKGSESVP AREDEMLDNP WEAKLSCRKE TAEDTTWGGW SGKGWDDRGC
501: GSGGWEKRDM EMNEWRRTRC SQDYREPRSY NPWKAGFGPD NTARREYGAN AGGWQTRRVS ETNRREWDVK RSSDGWGRRN RERDESYGYN SNYRNSRPIR
601: DDYQNRKVNF
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSV YCEDDGIPVW EKRFCEVIGS VPWQKVVEAK DFKSWYNGNV ITWDDSACED TFHNEKKRFW SQVNGLHCDV
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.