Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78048 | Canola | mitochondrion, nucleus | 86.09 | 85.27 |
| Bra006884.1-P | Field mustard | plastid | 81.77 | 55.9 |
| AT3G51940.2 | Thale cress | mitochondrion, nucleus | 40.29 | 36.76 |
| CDY41412 | Canola | nucleus | 16.31 | 25.95 |
| CDX70268 | Canola | plastid | 17.03 | 23.28 |
| KRH62921 | Soybean | nucleus | 16.79 | 19.72 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 17.51 | 18.39 |
| KRH29960 | Soybean | nucleus | 15.83 | 18.18 |
| Solyc01g068170.2.1 | Tomato | nucleus | 16.07 | 15.88 |
| PGSC0003DMT400017586 | Potato | nucleus | 17.51 | 11.79 |
| Zm00001d044509_P001 | Maize | nucleus | 5.04 | 8.97 |
Protein Annotations
| EnsemblPlants:CDX73674 | EnsemblPlantsGene:GSBRNA2T00109263001 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | ProteinID:CDX73674 | ProteinID:CDX73674.1 |
| SEG:seg | UniParc:UPI0004EF3C5B | MapMan:35.2 | : | : | : |
Description
BnaC08g23290D
Coordinates
chrLK031799:+:2063737..2065076
Molecular Weight (calculated)
48508.9 Da
IEP (calculated)
5.659
GRAVY (calculated)
-1.370
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKWNNRSRF NRRRSPSRWY SERPSSSGYG EDDGIPVWEK RFCEVIGSVP WPKVVEATNF KSWYTGNVIT WDDSACQETF HNEKKRFWSH VNGVHCDISL
101: PDPDLYVSDV DWDTTVDPEL ISDLEGAYFT PPDDEVKSGL KRGRRDRSWS GCSNLVPIEE ARMLKIPWEC SEEVHDVDGL VKKGNDWNVA ESSSDHPNDR
201: TRPWEAKPSF GNEKANDTMS GDCLWKEIEW KTEDKGNDRW GQGNDGWDTS GQQNKKAKGS ESVPAREDEM LDNPWEAKLS CRKETAEDTT WGGWSGKGWD
301: DRGGGSDGWE KRDLEMNEWR RTKCSQDYRE PRSYNPWKAG FGPGNTARRE YGPNAGGWQT RRVSETNRRE WDVKRSSDGW GRRNRERDES YRYNSNYRNS
401: RPIRDDYQSR KVNFSSK
101: PDPDLYVSDV DWDTTVDPEL ISDLEGAYFT PPDDEVKSGL KRGRRDRSWS GCSNLVPIEE ARMLKIPWEC SEEVHDVDGL VKKGNDWNVA ESSSDHPNDR
201: TRPWEAKPSF GNEKANDTMS GDCLWKEIEW KTEDKGNDRW GQGNDGWDTS GQQNKKAKGS ESVPAREDEM LDNPWEAKLS CRKETAEDTT WGGWSGKGWD
301: DRGGGSDGWE KRDLEMNEWR RTKCSQDYRE PRSYNPWKAG FGPGNTARRE YGPNAGGWQT RRVSETNRRE WDVKRSSDGW GRRNRERDES YRYNSNYRNS
401: RPIRDDYQSR KVNFSSK
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSV YCEDDGIPVW EKRFCEVIGS VPWQKVVEAK DFKSWYNGNV ITWDDSACED TFHNEKKRFW SQVNGLHCDV
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.