Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G330400.1 | Wheat | nucleus | 95.47 | 96.01 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 91.5 | 91.76 |
| Os01t0801200-01 | Rice | nucleus | 66.29 | 68.62 |
| EES03760 | Sorghum | nucleus | 58.36 | 60.59 |
| Zm00001d043187_P001 | Maize | nucleus | 56.09 | 58.06 |
| Zm00001d012569_P001 | Maize | nucleus | 52.41 | 54.9 |
| Zm00001d010383_P001 | Maize | cytosol | 39.09 | 38.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.86 | 32.68 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 24.93 | 29.43 |
| CDY41412 | Canola | nucleus | 20.11 | 27.1 |
| CDX70268 | Canola | plastid | 20.96 | 24.26 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 19.83 | 23.18 |
| Bra009495.1-P | Field mustard | plastid | 20.96 | 22.22 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 23.8 | 21.16 |
| Solyc01g068170.2.1 | Tomato | nucleus | 23.23 | 19.43 |
| KRH29960 | Soybean | nucleus | 17.85 | 17.36 |
| KRH62921 | Soybean | nucleus | 16.71 | 16.62 |
| PGSC0003DMT400017586 | Potato | nucleus | 23.8 | 13.57 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G323800.1 | EnsemblPlantsGene:TraesCS3D01G323800 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:-:436674932..436677718
Molecular Weight (calculated)
39838.4 Da
IEP (calculated)
5.445
GRAVY (calculated)
-1.013
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERRSSYRD GDRERAAAEA GRYWRPPRSQ AHGGGNVSVP LWEKKFCIDA CSIPWGKLCE AKKLMSLYMN IVDWDDSGAF EAFKDAKDRF CAAYHGQPCY
101: IPLPDPDMYI DVVNPDEYID PELVADLERS RRRAPRRDNT APDGWDSFIF ADKPVPATGW GDGDTTNTIG QQCSVNWDNH VEQQLLEANC KQSSGNWDSY
201: VSRPAETFVQ QSSGNWDTYV EQQGQTSAWG APIIPCTSNW GMNGDPWNHD YGWGSPAIQT DSWGDQKDSY CVSDSQAQGN SDGHWRRRNS QSGRRNSRNR
301: DRGGPISSKA MKSKYQADEH GGANNGWRHC RVRDNMQYSY EQPGYAANQS LAM
101: IPLPDPDMYI DVVNPDEYID PELVADLERS RRRAPRRDNT APDGWDSFIF ADKPVPATGW GDGDTTNTIG QQCSVNWDNH VEQQLLEANC KQSSGNWDSY
201: VSRPAETFVQ QSSGNWDTYV EQQGQTSAWG APIIPCTSNW GMNGDPWNHD YGWGSPAIQT DSWGDQKDSY CVSDSQAQGN SDGHWRRRNS QSGRRNSRNR
301: DRGGPISSKA MKSKYQADEH GGANNGWRHC RVRDNMQYSY EQPGYAANQS LAM
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.