Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G360400.1 | Wheat | nucleus | 69.5 | 67.33 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 68.62 | 66.67 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 68.62 | 66.29 |
| EES03760 | Sorghum | nucleus | 60.12 | 60.29 |
| Zm00001d043187_P001 | Maize | nucleus | 60.12 | 60.12 |
| Zm00001d012569_P001 | Maize | nucleus | 53.67 | 54.3 |
| Zm00001d010383_P001 | Maize | cytosol | 39.88 | 38.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.02 | 32.68 |
| Os11t0140900-01 | Rice | nucleus | 23.75 | 29.56 |
| CDY41412 | Canola | nucleus | 21.11 | 27.48 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 22.29 | 24.76 |
| CDX70268 | Canola | plastid | 21.99 | 24.59 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 21.11 | 23.84 |
| Bra009495.1-P | Field mustard | plastid | 21.99 | 22.52 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 24.05 | 20.65 |
| Solyc01g068170.2.1 | Tomato | nucleus | 23.17 | 18.72 |
| KRH29960 | Soybean | nucleus | 16.72 | 15.7 |
| KRH62921 | Soybean | nucleus | 16.13 | 15.49 |
| PGSC0003DMT400017586 | Potato | nucleus | 24.63 | 13.57 |
Protein Annotations
| EMBL:AK111895 | EMBL:AK112093 | EnsemblPlants:Os01t0801200-01 | EnsemblPlantsGene:Os01g0801200 | EntrezGene:4327962 | PANTHER:PTHR34567 |
| PANTHER:PTHR34567:SF3 | ProteinID:BAD68139.1 | ProteinID:BAD68288.1 | ProteinID:BAF06453.1 | ProteinID:BAS74799.1 | ProteinID:EEE55542.1 |
| RefSeq:XP_015625336.1 | SEG:seg | UniParc:UPI0000457D95 | UniProt:Q5VQJ7 | MapMan:35.2 | : |
Description
Conserved hypothetical protein. (Os01t0801200-01);Conserved hypothetical protein. (Os01t0801200-02)
Coordinates
chr1:-:33930232..33932942
Molecular Weight (calculated)
39093.8 Da
IEP (calculated)
7.164
GRAVY (calculated)
-1.187
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MGERRSGYRD RGGGEQGRYW RPPRSHGNGN FSVPLWEKKF CTDACAIPWG KLCETKKLMS LYKNVVDWDD SAALETFNDA KARFCAVYHG QPCDIPLPDP
101: NMYIDMVNQD EHVDPELVAD LEKSRRSYPK RDNTAPDGWD SFIFTNKPVP ATGWGDGETS NTPGQQYPTN WNNHVKQPTE ANCMQSSVNW DNYVSQPPQA
201: TVQQSSGNWD MYVKQQDQAN NWEAPTMPGT WDMKGDSLDA WKRDSGWGSA AIDSWDNHRE NCYVPDSQGW SYGHWKRRNN ESSRRNSRGR DRVGPISSKA
301: MKPKYHSEER NGANNGWRHC RVRNNMQYSY ENPGCNQSLA M
101: NMYIDMVNQD EHVDPELVAD LEKSRRSYPK RDNTAPDGWD SFIFTNKPVP ATGWGDGETS NTPGQQYPTN WNNHVKQPTE ANCMQSSVNW DNYVSQPPQA
201: TVQQSSGNWD MYVKQQDQAN NWEAPTMPGT WDMKGDSLDA WKRDSGWGSA AIDSWDNHRE NCYVPDSQGW SYGHWKRRNN ESSRRNSRGR DRVGPISSKA
301: MKPKYHSEER NGANNGWRHC RVRNNMQYSY ENPGCNQSLA M
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.