Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0140900-01 | Rice | nucleus | 76.55 | 85.77 |
| OQU82840 | Sorghum | nucleus | 43.32 | 47.16 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 43.0 | 44.15 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 43.0 | 44.0 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 42.67 | 43.81 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 42.02 | 42.72 |
| Zm00001d052461_P001 | Maize | nucleus | 38.11 | 41.34 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 38.11 | 37.14 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 37.46 | 35.94 |
| Os01t0801200-01 | Rice | nucleus | 24.76 | 22.29 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 21.17 | 21.52 |
| CDY41412 | Canola | nucleus | 18.24 | 21.37 |
| CDX70268 | Canola | plastid | 20.2 | 20.33 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 25.73 | 19.9 |
| Bra009495.1-P | Field mustard | plastid | 19.87 | 18.32 |
| KRH62921 | Soybean | nucleus | 19.22 | 16.62 |
| KRH29960 | Soybean | nucleus | 19.54 | 16.53 |
| Solyc01g068170.2.1 | Tomato | nucleus | 21.82 | 15.88 |
| PGSC0003DMT400017586 | Potato | nucleus | 22.15 | 10.99 |
Protein Annotations
| EnsemblPlants:Os12t0137400-00 | EnsemblPlantsGene:Os12g0137400 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | ProteinID:BAT15808.1 | SEG:seg |
| UniParc:UPI0003939F6A | UniProt:A0A0P0Y6N1 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os12t0137400-00)
Coordinates
chr12:+:1814889..1815861
Molecular Weight (calculated)
35808.0 Da
IEP (calculated)
6.638
GRAVY (calculated)
-0.978
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: PVQNLQAISN LYSSLKQSNQ NFFVYVICLY KHFRIHHLLA FLCCYNESDI AFVFTGHNCH PVPLWEREFC IYVGGISWHR FCDNKRYVCM YKNIEQWDDS
101: EAFDNFKNAK ARFWANYHGQ PSDISLPDPD MYIDKIDHNS KIDPELIADL KMVRLPFERD DELLPADGLG STDTDNKCQQ KQNQSGNWDI YVEKPTEVNK
201: WEQDSRSNMD WGTKHESWNE WSKNCSGWGS ALADSSALAD SSWGNWNNSN NHHSSNNRDS FNGVNRNRYQ DPNSISGRKR NSGGHIQQRN SRQRNQTEGY
301: QGSTPRW
101: EAFDNFKNAK ARFWANYHGQ PSDISLPDPD MYIDKIDHNS KIDPELIADL KMVRLPFERD DELLPADGLG STDTDNKCQQ KQNQSGNWDI YVEKPTEVNK
201: WEQDSRSNMD WGTKHESWNE WSKNCSGWGS ALADSSALAD SSWGNWNNSN NHHSSNNRDS FNGVNRNRYQ DPNSISGRKR NSGGHIQQRN SRQRNQTEGY
301: QGSTPRW
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.