Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G142200.1 | Wheat | nucleus | 90.97 | 90.97 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 88.29 | 88.0 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 86.29 | 85.43 |
| Os11t0140900-01 | Rice | nucleus | 45.15 | 49.27 |
| OQU82840 | Sorghum | nucleus | 45.48 | 48.23 |
| Zm00001d052461_P001 | Maize | nucleus | 42.81 | 45.23 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 43.81 | 42.67 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 42.14 | 39.38 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 41.47 | 39.37 |
| CDY41412 | Canola | nucleus | 22.74 | 25.95 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 29.77 | 25.36 |
| CDX70268 | Canola | plastid | 24.75 | 24.26 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 23.75 | 23.51 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 31.1 | 23.43 |
| Bra009495.1-P | Field mustard | plastid | 24.75 | 22.22 |
| Solyc01g068170.2.1 | Tomato | nucleus | 24.75 | 17.54 |
| KRH29960 | Soybean | nucleus | 21.07 | 17.36 |
| KRH62921 | Soybean | nucleus | 19.06 | 16.06 |
| PGSC0003DMT400017586 | Potato | nucleus | 23.75 | 11.47 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G135600.1 | EnsemblPlantsGene:TraesCS5A01G135600 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5A:-:306499743..306503849
Molecular Weight (calculated)
34159.4 Da
IEP (calculated)
6.948
GRAVY (calculated)
-1.302
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRSRRWPT KRHQDASWNP RPPPPYSGYS HVDNQCQVPL WEREFCSLVG GISWQRFCEN KHFAYMYKDI EQWDDSGAFE NFQNAKSRFW SHYHGQPSDI
101: PYPDPDLYID EVDHRCEVDP ELVADLDKVG VPFEADNKPA VAANNRCAQN QSGNWDIYLE KPTPEVNKWE ADNSVSNAGW GASQEPLSSW NKISTGWGDA
201: LAQPGWGSSG NNHCSGNNWN SPHGASSNNN TYYQDTGGAY GRKRNSGGGY SQQRNSKQRN QAESHHQRGR WQDHRDRGRH GERFPFDNRP NGQRAERGF
101: PYPDPDLYID EVDHRCEVDP ELVADLDKVG VPFEADNKPA VAANNRCAQN QSGNWDIYLE KPTPEVNKWE ADNSVSNAGW GASQEPLSSW NKISTGWGDA
201: LAQPGWGSSG NNHCSGNNWN SPHGASSNNN TYYQDTGGAY GRKRNSGGGY SQQRNSKQRN QAESHHQRGR WQDHRDRGRH GERFPFDNRP NGQRAERGF
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.