Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G135600.1 | Wheat | nucleus | 85.43 | 86.29 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 84.77 | 85.62 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 82.12 | 82.67 |
| Os11t0140900-01 | Rice | nucleus | 44.04 | 48.54 |
| OQU82840 | Sorghum | nucleus | 42.72 | 45.74 |
| Zm00001d052461_P001 | Maize | nucleus | 40.4 | 43.11 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 42.72 | 42.02 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 40.73 | 38.44 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 38.74 | 37.14 |
| CDY41412 | Canola | nucleus | 22.19 | 25.57 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 28.81 | 24.72 |
| CDX70268 | Canola | plastid | 22.85 | 22.62 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 28.81 | 21.91 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 21.85 | 21.85 |
| Bra009495.1-P | Field mustard | plastid | 22.85 | 20.72 |
| Solyc01g068170.2.1 | Tomato | nucleus | 24.17 | 17.3 |
| KRH29960 | Soybean | nucleus | 19.87 | 16.53 |
| KRH62921 | Soybean | nucleus | 18.54 | 15.77 |
| PGSC0003DMT400017586 | Potato | nucleus | 23.51 | 11.47 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G134500.1 | EnsemblPlantsGene:TraesCS5B01G134500 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:-:251574881..251578923
Molecular Weight (calculated)
34533.1 Da
IEP (calculated)
6.436
GRAVY (calculated)
-1.141
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEAPPRRL FEPSPPASVF RILSRLKNAL RYSHVDNQCQ VPLWEREFCS LVGGISWQRF CENKHFAYMY KEIEQWDDSG AFENFQNAKS RFWSHYHGQP
101: SDIPYPNPDL YIDEVDHRCE VDPELVADLD KVRVPFEADN EPAVAANNRC AQNQSGNWDI YLEKPTPEVN KWEADNSASN AGWGASQEPL SSWNKISTGW
201: GEALAEPGWG SSGNNHCPGN NWSSSHGVSS NNNTYYQDPG GAYGRKRNSG GGYSQQRNSK QRNQAESHHQ RGRWQDHRDR GRHGERFLFD NRPNGQRAER
301: GF
101: SDIPYPNPDL YIDEVDHRCE VDPELVADLD KVRVPFEADN EPAVAANNRC AQNQSGNWDI YLEKPTPEVN KWEADNSASN AGWGASQEPL SSWNKISTGW
201: GEALAEPGWG SSGNNHCPGN NWSSSHGVSS NNNTYYQDPG GAYGRKRNSG GGYSQQRNSK QRNQAESHHQ RGRWQDHRDR GRHGERFLFD NRPNGQRAER
301: GF
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.