Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052461_P001 | Maize | nucleus | 61.35 | 61.13 |
| Os11t0140900-01 | Rice | nucleus | 51.42 | 52.92 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 48.23 | 45.48 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 48.23 | 45.48 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 46.81 | 44.0 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 47.16 | 43.32 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 47.87 | 42.86 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 45.74 | 42.72 |
| EES03760 | Sorghum | nucleus | 29.79 | 24.71 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 24.47 | 22.85 |
| KXG22824 | Sorghum | nucleus | 21.28 | 21.43 |
| KXG22823 | Sorghum | nucleus | 33.33 | 20.98 |
| CDY41412 | Canola | nucleus | 19.15 | 20.61 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 28.01 | 19.9 |
| CDX70268 | Canola | plastid | 20.92 | 19.34 |
| Bra009495.1-P | Field mustard | plastid | 20.92 | 17.72 |
| KRH29960 | Soybean | nucleus | 20.92 | 16.25 |
| KRH62921 | Soybean | nucleus | 19.5 | 15.49 |
| Solyc01g068170.2.1 | Tomato | nucleus | 22.7 | 15.17 |
| PGSC0003DMT400017586 | Potato | nucleus | 22.7 | 10.34 |
Protein Annotations
| EnsemblPlants:OQU82840 | EnsemblPlantsGene:SORBI_3005G029000 | EntrezGene:8085630 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | ProteinID:EES07946.1 |
| ProteinID:OQU82840 | ProteinID:OQU82840.1 | ProteinID:OQU82841.1 | RefSeq:XP_002448958.1 | SEG:seg | UniParc:UPI0001A861BF |
| UniProt:C5Y465 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:2587624..2591380
Molecular Weight (calculated)
33184.5 Da
IEP (calculated)
7.892
GRAVY (calculated)
-1.394
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGWNRSRHV RWQRDRPRRP PLPPPDYGQG HCSVPLWERE FCSYVGNISW QRFCENKRYI SVCNILEHWD DSGAFENFQN SKARFWAHYH GQPSDISLPD
101: PDMYIDKVNH RCKVDPELVA DLDKVRVPFE MDNNSGLATG STNARADKNQ CGNWDIYVEK PSEVSRWDWE ANSKPDLSWG VKNESSSIWG NGSSGWGDAL
201: EKPNWRGSSN NHYSSSNRNN DFYGGSNNRY QQEDPSHTSG RKRNSGEYFQ QRNNKHTRQD ERYQRSSWQD HRGRNDEWRP WH
101: PDMYIDKVNH RCKVDPELVA DLDKVRVPFE MDNNSGLATG STNARADKNQ CGNWDIYVEK PSEVSRWDWE ANSKPDLSWG VKNESSSIWG NGSSGWGDAL
201: EKPNWRGSSN NHYSSSNRNN DFYGGSNNRY QQEDPSHTSG RKRNSGEYFQ QRNNKHTRQD ERYQRSSWQD HRGRNDEWRP WH
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.