Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G142200.1 | Wheat | nucleus | 92.0 | 92.31 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 88.0 | 88.29 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 82.67 | 82.12 |
| Os11t0140900-01 | Rice | nucleus | 45.33 | 49.63 |
| OQU82840 | Sorghum | nucleus | 44.0 | 46.81 |
| Zm00001d052461_P001 | Maize | nucleus | 42.0 | 44.52 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 44.0 | 43.0 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 42.33 | 39.69 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 40.0 | 38.1 |
| CDY41412 | Canola | nucleus | 20.67 | 23.66 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 22.33 | 22.19 |
| CDX70268 | Canola | plastid | 22.33 | 21.97 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 29.0 | 21.91 |
| Bra009495.1-P | Field mustard | plastid | 22.33 | 20.12 |
| Solyc01g068170.2.1 | Tomato | nucleus | 25.33 | 18.01 |
| KRH29960 | Soybean | nucleus | 19.67 | 16.25 |
| KRH62921 | Soybean | nucleus | 19.0 | 16.06 |
| PGSC0003DMT400017586 | Potato | nucleus | 24.33 | 11.79 |
Protein Annotations
| EMBL:AK376682 | EnsemblPlants:HORVU5Hr1G043530.1 | EnsemblPlantsGene:HORVU5Hr1G043530 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | SEG:seg |
| UniParc:UPI00020090FA | UniProt:F2EKK5 | MapMan:35.2 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EKK5]
Coordinates
chrchr5H:-:335838690..335842440
Molecular Weight (calculated)
34422.7 Da
IEP (calculated)
7.178
GRAVY (calculated)
-1.324
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRNQRWPT KRHHDASSNP RPPPPYSGYS HVDNQCQVPL WEREFCSLVG GISWQRFCEN KHFAYMYKEI EQWDDSGAFE NFQNAKSRFS SHYHGQPSNI
101: PFPDPDLYID EVDHRCEVDP ELLADLDKVR VPFEVDNEPA VAANNRCAQN QSGNWDIYLE KPTAEVNKWE AADNSRSNAG WGASQEPLSG WNKISTGWGD
201: ALAQPSWASS GNNHRSWNNW NSSHGASNNN NTYYQDPGSA YGRKRNSGGG YSQQRSSKQR NQAESHHQRG RWQDHRDRGR HGERFPFDNR PNGQRAERGF
101: PFPDPDLYID EVDHRCEVDP ELLADLDKVR VPFEVDNEPA VAANNRCAQN QSGNWDIYLE KPTAEVNKWE AADNSRSNAG WGASQEPLSG WNKISTGWGD
201: ALAQPSWASS GNNHRSWNNW NSSHGASNNN NTYYQDPGSA YGRKRNSGGG YSQQRSSKQR NQAESHHQRG RWQDHRDRGR HGERFPFDNR PNGQRAERGF
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.