Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G323800.1 | Wheat | nucleus | 96.01 | 95.47 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 91.17 | 90.91 |
| Os01t0801200-01 | Rice | nucleus | 66.67 | 68.62 |
| EES03760 | Sorghum | nucleus | 58.69 | 60.59 |
| Zm00001d043187_P001 | Maize | nucleus | 56.7 | 58.36 |
| Zm00001d012569_P001 | Maize | nucleus | 52.14 | 54.3 |
| Zm00001d010383_P001 | Maize | cytosol | 39.03 | 38.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.76 | 32.39 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 25.36 | 29.77 |
| CDY41412 | Canola | nucleus | 20.23 | 27.1 |
| CDX70268 | Canola | plastid | 21.08 | 24.26 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 19.94 | 23.18 |
| Bra009495.1-P | Field mustard | plastid | 21.08 | 22.22 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 23.65 | 20.91 |
| Solyc01g068170.2.1 | Tomato | nucleus | 23.36 | 19.43 |
| KRH29960 | Soybean | nucleus | 17.95 | 17.36 |
| KRH62921 | Soybean | nucleus | 17.09 | 16.9 |
| PGSC0003DMT400017586 | Potato | nucleus | 23.65 | 13.41 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G330400.1 | EnsemblPlantsGene:TraesCS3A01G330400 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:-:575001277..575004286
Molecular Weight (calculated)
39573.0 Da
IEP (calculated)
5.246
GRAVY (calculated)
-0.995
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERRSGYRD WDRAAAEAGR CWRPPRSQAH GGGNVSVPLW EKKFCIDACS IPWGKLCEAK KLMSLYTNIV DWDDSGAFEA FKDAKDRFCA AYHGQPCYIP
101: LPDPDMYIDV VNPDEYIDPE LVADLERSRR RAPRRDNTAP DCWDSFIFAD KPVPATGWGD GDTTNTIGQQ CSVNWDNHVE QQLLEANCKQ SSGNWDSYVS
201: QPAETFVQQS SGNWDTYVEQ QGQTSGWAAP IMPCTSNWGM NSGDPWNHDY GWGSPAIQTD SWGDQKDSYC VSDNQAQGSS DGHWRRRNSQ SGRRNSRNRD
301: RGGPISSKAM KSKYQADEHG GANNGWRHCR VRDGMQYSYE QPGYSNQSLA M
101: LPDPDMYIDV VNPDEYIDPE LVADLERSRR RAPRRDNTAP DCWDSFIFAD KPVPATGWGD GDTTNTIGQQ CSVNWDNHVE QQLLEANCKQ SSGNWDSYVS
201: QPAETFVQQS SGNWDTYVEQ QGQTSGWAAP IMPCTSNWGM NSGDPWNHDY GWGSPAIQTD SWGDQKDSYC VSDNQAQGSS DGHWRRRNSQ SGRRNSRNRD
301: RGGPISSKAM KSKYQADEHG GANNGWRHCR VRDGMQYSYE QPGYSNQSLA M
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.