Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G123600.1 | Wheat | plastid | 99.21 | 99.21 |
| TraesCS1D01G130800.1 | Wheat | plastid | 98.69 | 98.69 |
| OQU77586 | Sorghum | plastid | 91.08 | 91.08 |
| Zm00001d037675_P001 | Maize | extracellular | 90.29 | 90.29 |
| HORVU1Hr1G028330.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 97.38 | 86.08 |
| GSMUA_Achr7P10790_001 | Banana | cytosol | 76.12 | 83.57 |
| KRG97103 | Soybean | cytosol | 75.85 | 82.1 |
| KRH03601 | Soybean | cytosol | 74.8 | 80.97 |
| PGSC0003DMT400027091 | Potato | cytosol | 72.44 | 79.77 |
| Solyc02g068750.1.1 | Tomato | cytosol | 72.44 | 79.77 |
| VIT_05s0102g00570.t01 | Wine grape | cytosol | 38.85 | 78.72 |
| AT4G22720.1 | Thale cress | cytosol | 72.44 | 78.19 |
| CDX82960 | Canola | cytosol, mitochondrion | 71.92 | 77.62 |
| CDY67122 | Canola | endoplasmic reticulum, extracellular | 25.2 | 69.06 |
| Bra013635.1-P | Field mustard | cytosol | 72.44 | 65.09 |
| CDX79172 | Canola | cytosol | 72.18 | 65.01 |
| GSMUA_Achr10P... | Banana | cytosol | 66.14 | 56.63 |
| Bra020834.1-P | Field mustard | nucleus | 12.6 | 48.98 |
| TraesCS3B01G166200.1 | Wheat | plastid | 23.36 | 19.39 |
| TraesCS5B01G082600.1 | Wheat | plastid | 23.36 | 19.35 |
| TraesCS5B01G083500.1 | Wheat | plastid | 23.36 | 19.35 |
Protein Annotations
| MapMan:16.6.2.2.1 | Gene3D:3.30.420.40 | GO:GO:0000408 | GO:GO:0002949 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:Gcp-like_dom |
| InterPro:KAE1/TsaD | InterPro:Kae1/OSGEP | HAMAP:MF_01446 | PFAM:PF00814 | PRINTS:PR00789 | ScanProsite:PS01016 |
| PANTHER:PTHR11735 | PANTHER:PTHR11735:SF14 | InterPro:Peptidase_M22_CS | SUPFAM:SSF53067 | TIGRFAMs:TIGR00329 | EnsemblPlantsGene:TraesCS1B01G143400 |
| EnsemblPlants:TraesCS1B01G143400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:194784457..194793763
Molecular Weight (calculated)
40752.8 Da
IEP (calculated)
4.807
GRAVY (calculated)
0.068
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSPASS RPPGPFALGL ESSANKIGIG VVSMSGQILS NPRHTYITPP GHGFLPRETA QHHLVHLFPL LRAALAEADA SPADLACICY TMGPGMGGPL
101: QVAAASARAL SLLWGKPLVA VNHCVAHIEM GRAVTGAVDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR ILELSNDPSP GYNIEQLAKK
201: GEKFIDLPYV VKGMDVSFSG ILSFIEAAAI EKLENNECTP ADLCYSLQET LFAMLVEITE RAMAHCDSKD VLIVGGVGCN ERLQEMMRIM CSERGGRLFA
301: TDDRYCIDNG AMIAYTGLLA YAHGVTTPLE DSTFTQRFRT DEVHAIWREK EVPVLNNTDS DAAAEVSIDG TSGPTPIAVD S
101: QVAAASARAL SLLWGKPLVA VNHCVAHIEM GRAVTGAVDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR ILELSNDPSP GYNIEQLAKK
201: GEKFIDLPYV VKGMDVSFSG ILSFIEAAAI EKLENNECTP ADLCYSLQET LFAMLVEITE RAMAHCDSKD VLIVGGVGCN ERLQEMMRIM CSERGGRLFA
301: TDDRYCIDNG AMIAYTGLLA YAHGVTTPLE DSTFTQRFRT DEVHAIWREK EVPVLNNTDS DAAAEVSIDG TSGPTPIAVD S
001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN
Arabidopsis Description
Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.