Factsheet for VIT_05s0102g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10790_001	Banana	cytosol	87.77	47.55
OQU77586	Sorghum	plastid	80.85	39.9
Zm00001d037675_P001	Maize	extracellular	80.32	39.63
TraesCS1A01G123600.1	Wheat	plastid	79.26	39.11
TraesCS1B01G143400.1	Wheat	plastid	78.72	38.85
TraesCS1D01G130800.1	Wheat	plastid	78.72	38.85
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	78.72	34.34
GSMUA_Achr10P...	Banana	cytosol	79.26	33.48
VIT_15s0048g00390.t01	Wine grape	mitochondrion	28.72	11.54
VIT_00s2082g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100855115	wikigene:100855115	MapMan:16.6.2.2.1	Gene3D:3.30.420.40	ProteinID:CBI36680	ProteinID:CBI36680.3
UniProt:D7U1R4	EMBL:FN596500	GO:GO:0000408	GO:GO:0002949	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:Gcp-like_dom
InterPro:KAE1/TsaD	InterPro:Kae1/OSGEP	EntrezGene:LOC100855115	wikigene:LOC100855115	PFAM:PF00814	PRINTS:PR00789
PANTHER:PTHR11735	PANTHER:PTHR11735:SF14	SUPFAM:SSF53067	UniParc:UPI0001BE48D8	ArrayExpress:VIT_05s0102g00570	EnsemblPlantsGene:VIT_05s0102g00570
EnsemblPlants:VIT_05s0102g00570.t01	unigene:Vvi.14552	RefSeq:XP_003632079	RefSeq:XP_003632079.1	:	:

Description

No Description!

Coordinates

chr5:+:22503001..22503567

Molecular Weight (calculated)

20117.4 Da

IEP (calculated)

7.544

GRAVY (calculated)

0.190

Length

188 amino acids

Sequence
(BLAST)

001: MKNLIALGFE GSANKIGIGV VTLDGTILSN PRHTYITPPG QGFLPRETAQ HHLNHVLPLV RSALDEAGVS PAQIDCLCYT KGPGMGAPLQ VSAIVVRVLS
101: QLWKKPIVAV NHCVAHIEMG RVVTGAVDPV VLYVSGGNTQ VIAYSEGRYR IFGETIDIAV GNCLDRFARV LTLSNDPSPG YNIEQVYG

Best Arabidopsis Sequence Match ( AT4G22720.2 )
(BLAST)

001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN

Arabidopsis Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.