Factsheet for Zm00001d037675_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005106_P005
Zm00001d005749_P001
Zm00001d011680_P002
Zm00001d015515_P001
Zm00001d019922_P003
Zm00001d020492_P001
Zm00001d020495_P001
Zm00001d034715_P001
Zm00001d036726_P001
Zm00001d043705_P005
Zm00001d046805_P001
Zm00001d049088_P002
Zm00001d050116_P003
Zm00001d053746_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22720.1	Zm00001d005749_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d015515_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d020492_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d020495_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d036726_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d046805_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d053746_P001	AT2G25000.1	21798944
AT4G22720.1	Zm00001d011680_P002	AT4G00980.1	21798944
AT4G22720.1	Zm00001d043705_P005	AT4G00980.1	21798944
AT4G22720.1	Zm00001d005106_P005	AT5G06780.1	21798944
AT4G22720.1	Zm00001d019922_P003	AT5G06780.1	21798944
AT4G22720.1	Zm00001d050116_P003	AT5G06780.1	21798944
AT4G22720.1	Zm00001d049088_P002	AT5G19150.1	21798944
AT4G22720.1	Zm00001d034715_P001	AT5G51110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77586	Sorghum	plastid	96.59	96.59
TraesCS1A01G123600.1	Wheat	plastid	90.29	90.29
TraesCS1B01G143400.1	Wheat	plastid	90.29	90.29
TraesCS1D01G130800.1	Wheat	plastid	89.76	89.76
GSMUA_Achr7P10790_001	Banana	cytosol	76.9	84.44
KRG97103	Soybean	cytosol	75.59	81.82
KRH03601	Soybean	cytosol	75.07	81.25
PGSC0003DMT400027091	Potato	cytosol	72.97	80.35
Solyc02g068750.1.1	Tomato	cytosol	72.97	80.35
VIT_05s0102g00570.t01	Wine grape	cytosol	39.63	80.32
HORVU1Hr1G028330.1	Barley	cytosol, extracellular, mitochondrion, plastid	89.24	78.89
AT4G22720.1	Thale cress	cytosol	72.97	78.75
CDX82960	Canola	cytosol, mitochondrion	71.92	77.62
CDY67122	Canola	endoplasmic reticulum, extracellular	24.15	66.19
CDX79172	Canola	cytosol	72.44	65.25
Bra013635.1-P	Field mustard	cytosol	72.44	65.09
GSMUA_Achr10P...	Banana	cytosol	67.45	57.75
Bra020834.1-P	Field mustard	nucleus	12.07	46.94
Zm00001d040582_P002	Maize	plastid	10.24	18.48
Zm00001d040583_P001	Maize	cytosol, plastid	16.01	17.43

Protein Annotations

EntrezGene:100273984	MapMan:16.6.2.2.1	Gene3D:3.30.420.40	ProteinID:AQK84555.1	UniProt:B4FYG1	EMBL:BT042149
GO:GO:0000408	GO:GO:0002949	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
GO:GO:0046872	GO:GO:0061711	InterPro:Gcp-like_dom	InterPro:KAE1/TsaD	InterPro:Kae1/OSGEP	HAMAP:MF_01446
PFAM:PF00814	PRINTS:PR00789	ScanProsite:PS01016	PANTHER:PTHR11735	PANTHER:PTHR11735:SF14	InterPro:Peptidase_M22_CS
SUPFAM:SSF53067	TIGRFAMs:TIGR00329	UniParc:UPI00017B7C1C	EnsemblPlantsGene:Zm00001d037675	EnsemblPlants:Zm00001d037675_P001	EnsemblPlants:Zm00001d037675_T001
SEG:seg	:	:	:	:	:

Description

Actin-like ATPase superfamily protein

Coordinates

chr6:+:133723502..133727955

Molecular Weight (calculated)

41137.6 Da

IEP (calculated)

5.961

GRAVY (calculated)

0.028

Length

381 amino acids

Sequence
(BLAST)

001: MSSSPSPANR RPRGPLALGL ESSANKIGIG VVSLSGDILS NPRHTYVTPP GHGFLPRETA QHHLAHLLPL LRAALAESGV APADLACVCY TKGPGMGGPL
101: QVAAAAARAL SLLWRKPLVA VNHCVAHIEM GRAVTGAVDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLELSNDPSP GYNIEQLAKK
201: GEKFIDVPYV VKGMDVSFSG ILSFIEAAAI EKLKNNECTP ADLCYSLQET IFAMLVEITE RAMAHCDSKD VLIVGGVGCN ERLQEMMKIM CSERGGRLFA
301: TDDRYCIDNG AMIAYTGLLA YAHGMTTPLE ESTFTQRFRT DEVHAIWREK EMPVLNNTHS DAIAEVSKDE ASMATPIVID Y

Best Arabidopsis Sequence Match ( AT4G22720.2 )
(BLAST)

001: MKKKMIAIGF EGSANKIGVG IVTLDGTILA NPRHTYITPP GHGFLPRETA HHHLDHVLPL VKSALETSQV TPEEIDCICY TKGPGMGAPL QVSAIVVRVL
101: SQLWKKPIVA VNHCVAHIEM GRVVTGADDP VVLYVSGGNT QVIAYSEGRY RIFGETIDIA VGNCLDRFAR VLKLSNDPSP GYNIEQLAKK GENFIDLPYA
201: VKGMDVSFSG ILSYIETTAE EKLKNNECTP ADLCYSLQET VFAMLVEITE RAMAHCDKKD VLIVGGVGCN ERLQEMMRTM CSERDGKLFA TDDRYCIDNG
301: AMIAYTGLLA FVNGIETPIE DSTFTQRFRT DEVHAVWREK EAVLLGDKKV AAN

Arabidopsis Description

Probable tRNA N6-adenosine threonylcarbamoyltransferase [Source:UniProtKB/TrEMBL;Acc:O49653]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.