Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14911 | Sorghum | nucleus | 87.55 | 87.36 |
| Os08t0328300-02 | Rice | nucleus | 73.14 | 73.14 |
| Zm00001d019922_P003 | Maize | nucleus | 57.64 | 58.41 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 15.5 | 57.72 |
| Zm00001d005106_P005 | Maize | mitochondrion | 57.64 | 57.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.63 | 54.29 |
| Bra009226.1-P | Field mustard | cytosol | 35.59 | 52.75 |
| VIT_13s0156g00360.t01 | Wine grape | nucleus | 49.78 | 52.66 |
| AT5G13020.1 | Thale cress | nucleus | 45.2 | 52.14 |
| Bra006175.1-P | Field mustard | nucleus | 43.67 | 51.95 |
| CDX85675 | Canola | nucleus | 44.32 | 51.92 |
| Bra008863.1-P | Field mustard | nucleus | 44.54 | 51.78 |
| KRH38126 | Soybean | nucleus | 37.55 | 51.65 |
| KRH27522 | Soybean | nucleus | 49.13 | 51.61 |
| CDX70488 | Canola | nucleus | 43.23 | 51.56 |
| GSMUA_Achr11P... | Banana | nucleus | 28.17 | 51.39 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 31.44 | 51.06 |
| CDX78501 | Canola | nucleus | 43.23 | 51.03 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 54.37 | 50.92 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 34.28 | 50.48 |
| CDX73835 | Canola | nucleus | 35.37 | 50.31 |
| Solyc10g044960.1.1 | Tomato | nucleus | 47.38 | 50.23 |
| CDX97218 | Canola | nucleus | 45.2 | 50.12 |
| Solyc01g073960.2.1 | Tomato | nucleus | 46.51 | 49.88 |
| CDX69677 | Canola | nucleus | 44.98 | 49.88 |
| PGSC0003DMT400016200 | Potato | nucleus | 46.51 | 49.77 |
| KRH43436 | Soybean | cytosol | 46.94 | 48.97 |
| KRH36326 | Soybean | nucleus | 33.84 | 48.9 |
| KRH36382 | Soybean | nucleus | 50.0 | 48.72 |
| KRH13882 | Soybean | nucleus | 45.63 | 48.27 |
| Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 34.93 | 47.9 |
| KRG93077 | Soybean | nucleus | 43.45 | 47.61 |
| AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 32.75 | 46.88 |
| VIT_08s0007g06350.t01 | Wine grape | nucleus | 48.91 | 46.38 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 48.03 | 46.32 |
| Zm00001d020946_P005 | Maize | nucleus | 37.99 | 45.79 |
| PGSC0003DMT400053543 | Potato | nucleus | 38.65 | 44.92 |
| AT3G12140.3 | Thale cress | cytosol | 37.12 | 44.39 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 46.72 | 43.85 |
| Bra038698.1-P | Field mustard | extracellular | 36.68 | 43.75 |
| Solyc06g009900.1.1 | Tomato | nucleus | 37.34 | 43.73 |
| AT2G44440.1 | Thale cress | nucleus | 39.74 | 42.42 |
| CDY68247 | Canola | nucleus | 36.68 | 42.21 |
| CDY50571 | Canola | extracellular | 36.68 | 41.79 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 33.19 | 41.76 |
| Bra004832.1-P | Field mustard | cytosol | 36.9 | 41.22 |
| Solyc03g063280.2.1 | Tomato | nucleus | 40.83 | 40.74 |
| Zm00001d052893_P002 | Maize | nucleus | 26.86 | 38.68 |
| CDY42126 | Canola | cytosol | 22.05 | 38.55 |
| CDY17849 | Canola | plastid | 24.24 | 38.01 |
| KRH71929 | Soybean | nucleus | 35.15 | 37.97 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 52.62 | 33.75 |
| Bra023388.1-P | Field mustard | cytosol | 42.58 | 33.51 |
| Zm00001d006030_P001 | Maize | cytosol | 35.59 | 32.28 |
| Bra000353.1-P | Field mustard | nucleus | 36.24 | 31.26 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 10.7 | 31.01 |
| CDX95603 | Canola | nucleus | 38.43 | 30.88 |
| CDX91150 | Canola | nucleus | 45.63 | 30.6 |
| CDX83427 | Canola | nucleus | 34.5 | 29.76 |
| GSMUA_Achr11P... | Banana | plastid | 14.41 | 27.97 |
| CDY00757 | Canola | cytosol | 36.68 | 23.86 |
| Bra041089.1-P | Field mustard | cytosol | 14.19 | 21.67 |
| CDY45580 | Canola | mitochondrion | 15.07 | 20.66 |
| Zm00001d032901_P001 | Maize | nucleus | 17.25 | 11.6 |
Protein Annotations
| Gene3D:1.10.1240.40 | EntrezGene:100193058 | Gene3D:2.30.30.140 | MapMan:35.1 | UniProt:A0A1D6PZY0 | ProteinID:AQK51963.1 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:IPR005491 | InterPro:Lamin-B_rcpt_of_tudor | PFAM:PF03735 |
| PFAM:PF09465 | PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF2 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI000842ACF0 | EnsemblPlantsGene:Zm00001d050116 | EnsemblPlants:Zm00001d050116_P003 | EnsemblPlants:Zm00001d050116_T003 | : |
Description
Protein EMSY-LIKE 4
Coordinates
chr4:+:66982475..66992497
Molecular Weight (calculated)
50693.7 Da
IEP (calculated)
6.805
GRAVY (calculated)
-0.805
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIMICSASD RLAIGTDDDL PQSYQNSRGM KGSGRITGNG RDSVGASLYT RVQPQTDMET QIHELEQEAY CSVLRAFKAQ SDAITWEKES LITELRKELQ
101: VSDKEHRELL NKVNGDDIIR RIRKWRESTG GLMINLVNNS QRTHDPIPSP TTSARKRQKM SQPILSACVP APSAMHSQPL TAPMQPSSSG AKKGAQPGTK
201: VKKTKPGQKI PGGSAVKSMP SSAGPGGRGT IINRNMSAGL PPESSQLNPL IGRKVMTRWP DDNSFYEAEI TDYDASKDIY TLVYDINTAD ETWEWVDFKE
301: MAPEDIRWDG EEPDLNLIGR GAPVHGMKSS SRGGPMSGTG RDRGPQKNSF KKDYPSQNGI GKKSVDYIEI LHTETLIKEV ERVFSSANPD PLEMERAKKA
401: LKEHEQSLID AIARLAEASD DDRVRSLEYN RGWRNQHGGR YADDMTMDGH MAGDADAM
101: VSDKEHRELL NKVNGDDIIR RIRKWRESTG GLMINLVNNS QRTHDPIPSP TTSARKRQKM SQPILSACVP APSAMHSQPL TAPMQPSSSG AKKGAQPGTK
201: VKKTKPGQKI PGGSAVKSMP SSAGPGGRGT IINRNMSAGL PPESSQLNPL IGRKVMTRWP DDNSFYEAEI TDYDASKDIY TLVYDINTAD ETWEWVDFKE
301: MAPEDIRWDG EEPDLNLIGR GAPVHGMKSS SRGGPMSGTG RDRGPQKNSF KKDYPSQNGI GKKSVDYIEI LHTETLIKEV ERVFSSANPD PLEMERAKKA
401: LKEHEQSLID AIARLAEASD DDRVRSLEYN RGWRNQHGGR YADDMTMDGH MAGDADAM
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.