Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70488 | Canola | nucleus | 82.35 | 83.85 |
| CDX78501 | Canola | nucleus | 82.1 | 82.73 |
| CDX97218 | Canola | nucleus | 86.44 | 81.84 |
| CDX69677 | Canola | nucleus | 86.19 | 81.6 |
| AT5G13020.1 | Thale cress | nucleus | 80.31 | 79.09 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 22.25 | 70.73 |
| KRH36326 | Soybean | nucleus | 48.34 | 59.62 |
| Bra023388.1-P | Field mustard | cytosol | 86.7 | 58.25 |
| KRG93077 | Soybean | nucleus | 59.59 | 55.74 |
| CDX91150 | Canola | nucleus | 95.91 | 54.9 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 39.13 | 54.26 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 42.71 | 53.7 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 63.68 | 52.42 |
| CDX73835 | Canola | nucleus | 42.97 | 52.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.13 | 50.91 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 60.87 | 48.67 |
| CDY68247 | Canola | nucleus | 48.59 | 47.74 |
| Os08t0328300-02 | Rice | nucleus | 55.24 | 47.16 |
| OQU89150 | Sorghum | nucleus | 53.71 | 46.26 |
| EES14911 | Sorghum | nucleus | 53.96 | 45.97 |
| Zm00001d019922_P003 | Maize | nucleus | 52.43 | 45.35 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 54.22 | 44.82 |
| Zm00001d050116_P003 | Maize | nucleus | 51.92 | 44.32 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 53.71 | 44.3 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 53.71 | 44.3 |
| Zm00001d005106_P005 | Maize | mitochondrion | 52.17 | 44.25 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 53.2 | 43.88 |
| CDY50571 | Canola | extracellular | 44.76 | 43.53 |
| CDY42126 | Canola | cytosol | 28.64 | 42.75 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 53.2 | 42.62 |
| CDY17849 | Canola | plastid | 31.71 | 42.47 |
| Os09t0279000-01 | Rice | mitochondrion | 52.94 | 40.12 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 37.08 | 39.84 |
| CDX95603 | Canola | nucleus | 49.36 | 33.86 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 60.36 | 33.05 |
| CDX83427 | Canola | nucleus | 44.25 | 32.58 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 42.71 | 26.98 |
| CDY00757 | Canola | cytosol | 46.8 | 25.99 |
| CDY45580 | Canola | mitochondrion | 21.99 | 25.75 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | InterPro:Agenet_dom_plant | EnsemblPlants:CDX85675 | ProteinID:CDX85675 | ProteinID:CDX85675.1 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00143413001 | InterPro:IPR005491 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI0004EDFD35 | SEG:seg | : | : | : |
Description
BnaA02g01380D
Coordinates
chrLK031842:+:1142524..1145620
Molecular Weight (calculated)
42973.7 Da
IEP (calculated)
9.824
GRAVY (calculated)
-0.828
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYRPSDSSG TDDDLPPSRY QRSGRPAGNG RPSVLNTAPL SRVHNDMETQ IHLIEQEAYS SILRAFKAQS DAITWEKESL ITELRKELRV SDEEHRELLS
101: RVNADEMIRR IREWRKGNSF QSGAPQMVHD NAPSPAVSGS RKKQKTSQPI ASLAMGAPSP AMHPSMQPSS SAALRRGGPP PGPKTKKPKT SMQFPATGIA
201: GRPQPGTVTN EPDPLVGKKV WTKWPEDNNF YEAVITDYKA AEGRHALVYD MNTLNETWEW VNLKEISPGD IRWEGEDAGV SRKGGHPGQG RGSTKAMARG
301: GPAGQAIGRG RGSMKIQQHK AQNGVGKKAL GDIEILHTET LIKEVEKVFR SVNPNPAEVE KAKKVLRDHE QALVDAIARL EEMSYGESGN I
101: RVNADEMIRR IREWRKGNSF QSGAPQMVHD NAPSPAVSGS RKKQKTSQPI ASLAMGAPSP AMHPSMQPSS SAALRRGGPP PGPKTKKPKT SMQFPATGIA
201: GRPQPGTVTN EPDPLVGKKV WTKWPEDNNF YEAVITDYKA AEGRHALVYD MNTLNETWEW VNLKEISPGD IRWEGEDAGV SRKGGHPGQG RGSTKAMARG
301: GPAGQAIGRG RGSMKIQQHK AQNGVGKKAL GDIEILHTET LIKEVEKVFR SVNPNPAEVE KAKKVLRDHE QALVDAIARL EEMSYGESGN I
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.