Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d019922_P003 | Maize | nucleus | 82.86 | 84.51 |
OQU89150 | Sorghum | nucleus | 79.18 | 80.4 |
HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 67.03 | 65.33 |
TraesCS5B01G170500.1 | Wheat | nucleus | 65.29 | 63.5 |
TraesCS5D01G177600.1 | Wheat | nucleus | 65.08 | 63.29 |
TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 64.64 | 62.87 |
Os09t0279000-01 | Rice | mitochondrion | 65.94 | 58.91 |
Zm00001d050116_P003 | Maize | nucleus | 57.27 | 57.64 |
KRH38126 | Soybean | nucleus | 39.91 | 55.26 |
CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 14.32 | 53.66 |
GSMUA_Achr11P... | Banana | nucleus | 29.07 | 53.39 |
Bra006175.1-P | Field mustard | nucleus | 43.6 | 52.21 |
CDX85675 | Canola | nucleus | 44.25 | 52.17 |
Bra009226.1-P | Field mustard | cytosol | 34.92 | 52.1 |
GSMUA_AchrUn_... | Banana | nucleus | 43.38 | 51.95 |
CDX70488 | Canola | nucleus | 42.95 | 51.56 |
CDX78501 | Canola | nucleus | 43.38 | 51.55 |
Bra008863.1-P | Field mustard | nucleus | 43.6 | 51.02 |
PGSC0003DMT400016200 | Potato | nucleus | 47.29 | 50.93 |
Solyc01g073960.2.1 | Tomato | nucleus | 47.07 | 50.82 |
CDX73835 | Canola | nucleus | 35.36 | 50.62 |
CDX97218 | Canola | nucleus | 45.12 | 50.36 |
CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 30.8 | 50.35 |
KRH27522 | Soybean | nucleus | 47.51 | 50.23 |
CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 33.84 | 50.16 |
Solyc10g044960.1.1 | Tomato | nucleus | 46.85 | 50.0 |
AT5G13020.1 | Thale cress | nucleus | 42.95 | 49.87 |
VIT_13s0156g00360.t01 | Wine grape | nucleus | 46.42 | 49.42 |
GSMUA_Achr4P13240_001 | Banana | nucleus | 52.28 | 49.28 |
Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 35.57 | 49.1 |
CDX69677 | Canola | nucleus | 43.82 | 48.91 |
KRG93077 | Soybean | nucleus | 42.52 | 46.89 |
AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 32.54 | 46.88 |
KRH36326 | Soybean | nucleus | 32.1 | 46.69 |
KRH36382 | Soybean | nucleus | 47.51 | 46.6 |
KRH13882 | Soybean | nucleus | 43.38 | 46.19 |
KRH43436 | Soybean | cytosol | 43.82 | 46.01 |
VIT_06s0004g01350.t01 | Wine grape | nucleus | 47.29 | 45.89 |
Zm00001d020946_P005 | Maize | nucleus | 37.53 | 45.53 |
VIT_08s0007g06350.t01 | Wine grape | nucleus | 47.07 | 44.93 |
PGSC0003DMT400053543 | Potato | nucleus | 38.39 | 44.92 |
AT3G12140.3 | Thale cress | cytosol | 36.66 | 44.13 |
Bra038698.1-P | Field mustard | extracellular | 36.44 | 43.75 |
CDY68247 | Canola | nucleus | 37.74 | 43.72 |
GSMUA_Achr3P11710_001 | Banana | nucleus | 45.55 | 43.03 |
Solyc06g009900.1.1 | Tomato | nucleus | 35.79 | 42.2 |
AT2G44440.1 | Thale cress | nucleus | 39.26 | 42.19 |
KRH71929 | Soybean | nucleus | 38.61 | 41.98 |
Bra004832.1-P | Field mustard | cytosol | 37.31 | 41.95 |
CDY50571 | Canola | extracellular | 36.23 | 41.54 |
Solyc03g063280.2.1 | Tomato | nucleus | 41.0 | 41.18 |
CDY17849 | Canola | plastid | 25.81 | 40.75 |
GSMUA_Achr4P11340_001 | Banana | cytosol | 31.24 | 39.56 |
CDY42126 | Canola | cytosol | 22.34 | 39.31 |
Zm00001d052893_P002 | Maize | nucleus | 23.64 | 34.28 |
GSMUA_Achr7P06400_001 | Banana | cytosol | 52.28 | 33.75 |
Bra023388.1-P | Field mustard | cytosol | 42.08 | 33.33 |
Bra000353.1-P | Field mustard | nucleus | 36.66 | 31.83 |
Zm00001d006030_P001 | Maize | cytosol | 34.71 | 31.68 |
CDX95603 | Canola | nucleus | 38.39 | 31.05 |
PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 10.63 | 31.01 |
CDX83427 | Canola | nucleus | 34.92 | 30.32 |
CDX91150 | Canola | nucleus | 44.47 | 30.01 |
GSMUA_Achr11P... | Banana | plastid | 13.02 | 25.42 |
CDY00757 | Canola | cytosol | 37.96 | 24.86 |
Bra041089.1-P | Field mustard | cytosol | 15.4 | 23.67 |
CDY45580 | Canola | mitochondrion | 16.05 | 22.16 |
Zm00001d032901_P001 | Maize | nucleus | 15.4 | 10.43 |
Protein Annotations
Gene3D:1.10.1240.40 | MapMan:35.1 | UniProt:A0A1D6EK63 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom |
InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 |
InterPro:IPR005491 | ProteinID:ONM20330.1 | PFAM:PF03735 | PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF2 |
SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 | UniParc:UPI0008456F5D | EnsemblPlantsGene:Zm00001d005106 | EnsemblPlants:Zm00001d005106_P005 |
EnsemblPlants:Zm00001d005106_T005 | SEG:seg | : | : | : | : |
Description
Protein EMSY-LIKE 4
Coordinates
chr2:+:158482424..158485915
Molecular Weight (calculated)
49984.9 Da
IEP (calculated)
9.646
GRAVY (calculated)
-0.711
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFLNAVFSK CRVLNSMLVA GTDDDLPQFP HKSIRGSGRV SGNGRAVVPA GSYARAPTDM VAQVQQLEQE AYRSVLRAFK AQSDAITWEK EGLMTELRKE
101: LRVSDKAHRE LLNRVNNDNI ICSIREWRST GGLQASLSNN PQLIHDSVPS PTTSGRKRQK TSQSVPALPA PPPAMHSQQL ATPTQPSSST ARKAVPPGHK
201: GKKMKPGQKV PGGSAAKPIP SSAGPSGRGP HMNRGGSAPE AQAQNVDPLI GRKVMSRWPE DNSFYEAVIY EYDAETGLHA LVYDIDTADE TWEWVDLKEM
301: GPEDIRWQED DSGIDPVTYL RSRGGPTSGV RKPAGRGGPM PGSVRGRGLQ KNMPKKDFPP PQNGVGKRSS DDIDILHTES LIKEVGKVFS VSNPDPQEVE
401: KAKKALKEQE QSLIDAIARL AEASDGESDG HNRGRRNLYA ANQHQASYVG AMPVGDRAGA M
101: LRVSDKAHRE LLNRVNNDNI ICSIREWRST GGLQASLSNN PQLIHDSVPS PTTSGRKRQK TSQSVPALPA PPPAMHSQQL ATPTQPSSST ARKAVPPGHK
201: GKKMKPGQKV PGGSAAKPIP SSAGPSGRGP HMNRGGSAPE AQAQNVDPLI GRKVMSRWPE DNSFYEAVIY EYDAETGLHA LVYDIDTADE TWEWVDLKEM
301: GPEDIRWQED DSGIDPVTYL RSRGGPTSGV RKPAGRGGPM PGSVRGRGLQ KNMPKKDFPP PQNGVGKRSS DDIDILHTES LIKEVGKVFS VSNPDPQEVE
401: KAKKALKEQE QSLIDAIARL AEASDGESDG HNRGRRNLYA ANQHQASYVG AMPVGDRAGA M
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.