Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70488 | Canola | nucleus | 93.51 | 93.75 |
| CDX78501 | Canola | nucleus | 94.03 | 93.3 |
| Bra008863.1-P | Field mustard | nucleus | 87.27 | 85.28 |
| AT5G13020.1 | Thale cress | nucleus | 82.6 | 80.1 |
| KRH36326 | Soybean | nucleus | 47.01 | 57.1 |
| KRG93077 | Soybean | nucleus | 60.52 | 55.74 |
| Bra009226.1-P | Field mustard | cytosol | 44.68 | 55.66 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 65.97 | 53.47 |
| Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 44.42 | 51.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.91 | 50.91 |
| Bra023388.1-P | Field mustard | cytosol | 76.1 | 50.34 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 61.56 | 48.47 |
| Os08t0328300-02 | Rice | nucleus | 57.14 | 48.03 |
| Bra038698.1-P | Field mustard | extracellular | 45.71 | 45.83 |
| EES14911 | Sorghum | nucleus | 54.29 | 45.53 |
| Bra004832.1-P | Field mustard | cytosol | 48.31 | 45.37 |
| OQU89150 | Sorghum | nucleus | 52.99 | 44.93 |
| Zm00001d019922_P003 | Maize | nucleus | 51.95 | 44.25 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 54.29 | 44.19 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 53.77 | 43.67 |
| Zm00001d050116_P003 | Maize | nucleus | 51.95 | 43.67 |
| Zm00001d005106_P005 | Maize | mitochondrion | 52.21 | 43.6 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 53.51 | 43.46 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 52.73 | 42.83 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 53.51 | 42.21 |
| Os09t0279000-01 | Rice | mitochondrion | 53.51 | 39.92 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 36.88 | 39.01 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 61.56 | 33.19 |
| Bra000353.1-P | Field mustard | nucleus | 44.42 | 32.2 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 43.12 | 26.82 |
| Bra041089.1-P | Field mustard | cytosol | 20.0 | 25.67 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | InterPro:Agenet_dom_plant | EnsemblPlantsGene:Bra006175 | EnsemblPlants:Bra006175.1 | EnsemblPlants:Bra006175.1-P |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:IPR005491 | UniProt:M4CPN6 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI000253FA44 | SEG:seg | : | : | : |
Description
AT5G13020 (E=8e-175) | emsy N terminus domain-containing protein / ENT domain-containing protein
Coordinates
chrA03:-:2349724..2351776
Molecular Weight (calculated)
42399.7 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.928
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYRPSDSSG TDDDLPPSHQ NRYQRSGRPA GNGRPSVLNS APLSRVHNDM ETQIHLMEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKG NSVPQMVHDN APSPAVSGSR KKQKTSQSMG PPSPALHPSM QPSSSALRRG GPPPPGPKTK KPKTFPATGI AGRPQGGALT
201: NEPGEAGSYD PLIGKKVWTK WPEDNHFYEA VITNYDPIEG RHALVYDIST PNETWEWVNL KEISPGDIRW EGEDSGVSRK GGHPGQGRGS STKAMPRGGP
301: SGRGRGNMKI QPHKAHNGIG KKSLGDIEIL HTDTLIKEIE KVFGSVNPNP AEVEKAKRVL RDHEQALVDA IARLEELSDG ESGNI
101: LLSRVNADEM IRRIREWRKG NSVPQMVHDN APSPAVSGSR KKQKTSQSMG PPSPALHPSM QPSSSALRRG GPPPPGPKTK KPKTFPATGI AGRPQGGALT
201: NEPGEAGSYD PLIGKKVWTK WPEDNHFYEA VITNYDPIEG RHALVYDIST PNETWEWVNL KEISPGDIRW EGEDSGVSRK GGHPGQGRGS STKAMPRGGP
301: SGRGRGNMKI QPHKAHNGIG KKSLGDIEIL HTDTLIKEIE KVFGSVNPNP AEVEKAKRVL RDHEQALVDA IARLEELSDG ESGNI
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.