Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78501 | Canola | nucleus | 96.88 | 95.88 |
| Bra006175.1-P | Field mustard | nucleus | 93.75 | 93.51 |
| AT5G13020.1 | Thale cress | nucleus | 85.68 | 82.87 |
| CDX85675 | Canola | nucleus | 83.85 | 82.35 |
| CDX97218 | Canola | nucleus | 88.28 | 82.08 |
| CDX69677 | Canola | nucleus | 87.5 | 81.36 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 23.18 | 72.36 |
| KRH36326 | Soybean | nucleus | 48.18 | 58.36 |
| KRG93077 | Soybean | nucleus | 60.68 | 55.74 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 43.75 | 54.02 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 39.58 | 53.9 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 66.67 | 53.89 |
| CDX73835 | Canola | nucleus | 44.53 | 53.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.52 | 50.39 |
| CDY68247 | Canola | nucleus | 49.74 | 47.99 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 60.42 | 47.44 |
| CDX91150 | Canola | nucleus | 83.07 | 46.71 |
| Os08t0328300-02 | Rice | nucleus | 55.21 | 46.29 |
| EES14911 | Sorghum | nucleus | 54.43 | 45.53 |
| Zm00001d019922_P003 | Maize | nucleus | 52.86 | 44.91 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 54.95 | 44.61 |
| OQU89150 | Sorghum | nucleus | 52.6 | 44.49 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 54.17 | 43.88 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 53.91 | 43.67 |
| CDY50571 | Canola | extracellular | 45.57 | 43.53 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 53.39 | 43.25 |
| Zm00001d050116_P003 | Maize | nucleus | 51.56 | 43.23 |
| Zm00001d005106_P005 | Maize | mitochondrion | 51.56 | 42.95 |
| CDY17849 | Canola | plastid | 32.55 | 42.81 |
| CDY42126 | Canola | cytosol | 29.17 | 42.75 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 54.17 | 42.62 |
| Os09t0279000-01 | Rice | mitochondrion | 53.65 | 39.92 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 36.46 | 38.46 |
| CDX95603 | Canola | nucleus | 49.48 | 33.33 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 60.42 | 32.49 |
| CDX83427 | Canola | nucleus | 43.75 | 31.64 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 42.97 | 26.66 |
| CDY00757 | Canola | cytosol | 47.92 | 26.14 |
| CDY45580 | Canola | mitochondrion | 22.4 | 25.75 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | InterPro:Agenet_dom_plant | EnsemblPlants:CDX70488 | ProteinID:CDX70488 | ProteinID:CDX70488.1 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00140316001 | InterPro:IPR005491 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI0004EC83CF | SEG:seg | : | : | : |
Description
BnaC03g05720D
Coordinates
chrLK031791:-:669120..672421
Molecular Weight (calculated)
42246.6 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.912
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYRPSDSSG TDDDLPPSHQ SRYQRSGRPA GNGRPSVLNS APLSRVHSDM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKG NSVPQMVHDN APSPAVSGSR KKQKTSQSMG PPSPALHPSM QPSSSALRRG GPPPPGPKTK KPKTFPATGI AGRPQGGALT
201: NEPGEEGSYD PLIGKKVWTK WPEDNHFYEA VITNYNPIEG RHALVYDIST PNETWEWVNL KEISPGDIRW EGEDSGVSRK GGHPGQGRGS AKAMPRGGPT
301: GRGRGNMKIQ PHKAQNGIGK KALGDIEILH TDTLIKEIEK VFGSVNPNPA EVEKAKRVLR DHEQALVDAI AKLEEMSDGE SGNI
101: LLSRVNADEM IRRIREWRKG NSVPQMVHDN APSPAVSGSR KKQKTSQSMG PPSPALHPSM QPSSSALRRG GPPPPGPKTK KPKTFPATGI AGRPQGGALT
201: NEPGEEGSYD PLIGKKVWTK WPEDNHFYEA VITNYNPIEG RHALVYDIST PNETWEWVNL KEISPGDIRW EGEDSGVSRK GGHPGQGRGS AKAMPRGGPT
301: GRGRGNMKIQ PHKAQNGIGK KALGDIEILH TDTLIKEIEK VFGSVNPNPA EVEKAKRVLR DHEQALVDAI AKLEEMSDGE SGNI
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.