Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68247 | Canola | nucleus | 97.95 | 71.86 |
| AT2G44440.1 | Thale cress | nucleus | 73.63 | 50.12 |
| CDX83427 | Canola | nucleus | 70.21 | 38.61 |
| CDX95603 | Canola | nucleus | 70.55 | 36.14 |
| VIT_13s0156g00360.t01 | Wine grape | nucleus | 49.66 | 33.49 |
| Solyc01g073960.2.1 | Tomato | nucleus | 48.29 | 33.02 |
| PGSC0003DMT400016200 | Potato | nucleus | 48.29 | 32.94 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 34.93 | 32.8 |
| KRH27522 | Soybean | nucleus | 48.63 | 32.57 |
| CDX70488 | Canola | nucleus | 42.81 | 32.55 |
| CDX78501 | Canola | nucleus | 43.15 | 32.47 |
| CDX85675 | Canola | nucleus | 42.47 | 31.71 |
| Solyc10g044960.1.1 | Tomato | nucleus | 46.58 | 31.48 |
| CDX73835 | Canola | nucleus | 34.25 | 31.06 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 29.79 | 30.85 |
| CDX69677 | Canola | nucleus | 42.81 | 30.27 |
| CDX97218 | Canola | nucleus | 42.47 | 30.02 |
| KRH13882 | Soybean | nucleus | 44.18 | 29.79 |
| KRH36382 | Soybean | nucleus | 47.26 | 29.36 |
| CDY45580 | Canola | mitochondrion | 32.53 | 28.44 |
| KRH43436 | Soybean | cytosol | 42.47 | 28.25 |
| PGSC0003DMT400053543 | Potato | nucleus | 37.67 | 27.92 |
| OQU89150 | Sorghum | nucleus | 41.78 | 26.87 |
| Zm00001d019922_P003 | Maize | nucleus | 41.44 | 26.77 |
| Os08t0328300-02 | Rice | nucleus | 41.44 | 26.42 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 42.47 | 26.22 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 42.12 | 25.95 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 42.12 | 25.95 |
| CDY50571 | Canola | extracellular | 35.62 | 25.87 |
| Solyc06g009900.1.1 | Tomato | nucleus | 34.59 | 25.83 |
| Zm00001d005106_P005 | Maize | mitochondrion | 40.75 | 25.81 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 41.1 | 25.32 |
| EES14911 | Sorghum | nucleus | 39.38 | 25.05 |
| GSMUA_Achr11P... | Banana | plastid | 20.21 | 25.0 |
| Zm00001d050116_P003 | Maize | nucleus | 38.01 | 24.24 |
| CDY42126 | Canola | cytosol | 21.23 | 23.66 |
| Os09t0279000-01 | Rice | mitochondrion | 40.75 | 23.06 |
| CDX91150 | Canola | nucleus | 41.78 | 17.86 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 33.22 | 15.67 |
| CDY00757 | Canola | cytosol | 33.9 | 14.06 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 1.03 | 2.44 |
Protein Annotations
| EnsemblPlants:CDY17849 | EnsemblPlantsGene:GSBRNA2T00002181001 | Gene3D:2.30.30.140 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | ncoils:Coil | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 |
| ProteinID:CDY17849 | ProteinID:CDY17849.1 | SUPFAM:SSF63748 | UniParc:UPI0004EEF7C8 | UniProt:A0A078FXE5 | MapMan:35.1 |
Description
BnaC04g03700DBnaC04g03700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXE5]
Coordinates
chrLK032079:+:53481..55216
Molecular Weight (calculated)
31980.5 Da
IEP (calculated)
10.024
GRAVY (calculated)
-0.879
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNAAQVVHD TLPTPSVSAS VKKQKLNQPM PSQPFASHPQ ADLTNQFASS TAKRGPVPNV KGKKHKPGFP GSSSAKPVSY HPSDQPQRGQ VMNRVPPGPT
101: SSSEPTNGND PESFVGRKVR TRWPEDNTFY EAVITKYSPV EGRHALVYDI GTPNETWEWV NLSEISPGDI EWIGEDPRVG NQYGVNGQGH GLNRTTGPNS
201: VPQRGSGLAK TSIKKDFRTS QNGTGKRKHM DIRIRQTNVL IRDVERVLGS HNPDPQEVER AKRMLEEQEQ ALVGAIAKLG DISDGENGKC LV
101: SSSEPTNGND PESFVGRKVR TRWPEDNTFY EAVITKYSPV EGRHALVYDI GTPNETWEWV NLSEISPGDI EWIGEDPRVG NQYGVNGQGH GLNRTTGPNS
201: VPQRGSGLAK TSIKKDFRTS QNGTGKRKHM DIRIRQTNVL IRDVERVLGS HNPDPQEVER AKRMLEEQEQ ALVGAIAKLG DISDGENGKC LV
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.