CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041089.1-P	Field mustard	cytosol	86.23	96.0
CDY17849	Canola	plastid	28.44	32.53
CDY68247	Canola	nucleus	32.63	27.39
AT2G44440.1	Thale cress	nucleus	31.14	24.24
CDX70488	Canola	nucleus	25.75	22.4
CDX98955	Canola	cytoskeleton, cytosol, nucleus	20.66	22.19
CDX97218	Canola	nucleus	27.25	22.03
CDX69677	Canola	nucleus	27.25	22.03
CDX85675	Canola	nucleus	25.75	21.99
CDX78501	Canola	nucleus	25.45	21.91
GSMUA_Achr11P...	Banana	plastid	15.27	21.61
CDX73835	Canola	nucleus	20.66	21.43
CDX70068	Canola	cytoskeleton, cytosol, nucleus	17.37	20.57
CDX83427	Canola	nucleus	32.63	20.53
VIT_13s0156g00360.t01	Wine grape	nucleus	26.35	20.32
CDX95603	Canola	nucleus	34.43	20.18
Solyc01g073960.2.1	Tomato	nucleus	25.15	19.67
PGSC0003DMT400016200	Potato	nucleus	25.15	19.63
KRH27522	Soybean	nucleus	25.45	19.5
Solyc10g044960.1.1	Tomato	nucleus	25.15	19.44
CDY42126	Canola	cytosol	14.97	19.08
KRH13882	Soybean	nucleus	23.35	18.01
KRH36382	Soybean	nucleus	25.15	17.87
CDY50571	Canola	extracellular	20.96	17.41
PGSC0003DMT400053543	Potato	nucleus	20.36	17.26
Solyc06g009900.1.1	Tomato	nucleus	20.06	17.14
CDY17848	Canola	cytoskeleton, cytosol, nucleus	6.29	17.07
OQU89150	Sorghum	nucleus	22.16	16.3
HORVU5Hr1G053150.1	Barley	nucleus, plastid	23.05	16.28
TraesCS5D01G177600.1	Wheat	nucleus	23.05	16.24
KRH43436	Soybean	cytosol	21.26	16.17
Zm00001d019922_P003	Maize	nucleus	21.86	16.15
Zm00001d005106_P005	Maize	mitochondrion	22.16	16.05
TraesCS5A01G173100.1	Wheat	nucleus, plastid	22.75	16.03
TraesCS5B01G170500.1	Wheat	nucleus	22.75	16.03
Os08t0328300-02	Rice	nucleus	21.86	15.94
EES14911	Sorghum	nucleus	20.96	15.25
Zm00001d050116_P003	Maize	nucleus	20.66	15.07
Os09t0279000-01	Rice	mitochondrion	22.16	14.34
CDX91150	Canola	nucleus	25.15	12.3
CDY00757	Canola	cytosol	21.56	10.23
KXG35268	Sorghum	mitochondrion, nucleus	18.26	9.85

Protein Annotations

EnsemblPlants:CDY45580	EnsemblPlantsGene:GSBRNA2T00082303001	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0050832	InterPro:EMSY-LIKE_plant	PANTHER:PTHR33432	ProteinID:CDY45580	ProteinID:CDY45580.1	UniParc:UPI0004EDE839
UniProt:A0A078I459	MapMan:35.1	:	:	:	:

Description

BnaA04g14470DBnaA04g14470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I459]

Coordinates

chrLK032629:-:10031..12892

Molecular Weight (calculated)

38664.9 Da

IEP (calculated)

9.433

GRAVY (calculated)

-0.710

Length

334 amino acids

Sequence
(BLAST)

001: MSLIWFVHSR NHQRSTFIRQ LNLNLRHYST AELQLRYGIE EEMVEMLQIA PFTKESLAEA KIKLEALDEK DRERRRTPEL KNNLEYYVYA TKEKERLDSL
101: KAIGSPISLR SEELTARPVA VDYTQKYPTE VKEIIKEWET NKTWLPKVKL DEVVYLILNS FNEFFSLGFP WSSSAKPISY RPSDQPPRGQ VMTKYDPVEI
201: SPRDIEWIAE DHGAGNPYGY NGQANVLSRT TGPNNVLQKG SSLAKTSIKN ELRPSQNGTG KRNHVDIRIS RPTSVLIREV ERVRGSHNPD PQEVEMAKRV
301: LEEQEHALVG AITKLGDISK WRKWHVFSLQ RSFD

Best Arabidopsis Sequence Match ( AT2G44440.1 )
(BLAST)

001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR

Arabidopsis Description

EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.