Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06780.1 | OQU85212 | AT1G19010.1 | 21798944 |
| AT5G06780.1 | EES13629 | AT4G30490.1 | 21798944 |
| AT5G06780.1 | KXG26754 | AT4G30490.1 | 21798944 |
| AT5G06780.1 | OQU81040 | AT5G65683.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 10.66 | 53.66 |
| OQU89150 | Sorghum | nucleus | 39.1 | 53.3 |
| GSMUA_Achr11P... | Banana | nucleus | 20.03 | 49.4 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 37.8 | 49.37 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 37.64 | 49.26 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 37.48 | 48.95 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 37.48 | 48.95 |
| KRH38126 | Soybean | nucleus | 24.39 | 45.35 |
| Os09t0279000-01 | Rice | mitochondrion | 37.32 | 44.77 |
| EES14911 | Sorghum | nucleus | 33.12 | 44.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.63 | 44.42 |
| Bra009226.1-P | Field mustard | cytosol | 21.97 | 44.01 |
| Bra008863.1-P | Field mustard | nucleus | 27.79 | 43.65 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 19.87 | 43.62 |
| Bra006175.1-P | Field mustard | nucleus | 26.82 | 43.12 |
| CDX70488 | Canola | nucleus | 26.66 | 42.97 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 21.49 | 42.77 |
| CDX85675 | Canola | nucleus | 26.98 | 42.71 |
| CDX78501 | Canola | nucleus | 26.66 | 42.53 |
| PGSC0003DMT400016200 | Potato | nucleus | 29.24 | 42.29 |
| CDX73835 | Canola | nucleus | 21.97 | 42.24 |
| Solyc01g073960.2.1 | Tomato | nucleus | 29.08 | 42.15 |
| CDX97218 | Canola | nucleus | 28.11 | 42.13 |
| AT5G13020.1 | Thale cress | nucleus | 26.98 | 42.07 |
| CDX69677 | Canola | nucleus | 27.79 | 41.65 |
| VIT_13s0156g00360.t01 | Wine grape | nucleus | 28.92 | 41.34 |
| Solyc10g044960.1.1 | Tomato | nucleus | 28.43 | 40.74 |
| Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 21.97 | 40.72 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 31.66 | 40.08 |
| KRH36326 | Soybean | nucleus | 20.36 | 39.75 |
| KRH27522 | Soybean | nucleus | 27.63 | 39.22 |
| KRG93077 | Soybean | nucleus | 26.01 | 38.52 |
| AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 19.87 | 38.44 |
| CDY68247 | Canola | nucleus | 24.56 | 38.19 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 29.08 | 37.89 |
| EER96978 | Sorghum | nucleus | 23.91 | 37.56 |
| KRH43436 | Soybean | cytosol | 26.49 | 37.36 |
| KRH13882 | Soybean | nucleus | 25.69 | 36.72 |
| AT2G44440.1 | Thale cress | nucleus | 25.36 | 36.6 |
| KRH36382 | Soybean | nucleus | 27.79 | 36.6 |
| AT3G12140.3 | Thale cress | cytosol | 22.62 | 36.55 |
| PGSC0003DMT400053543 | Potato | nucleus | 23.1 | 36.29 |
| VIT_08s0007g06350.t01 | Wine grape | nucleus | 28.11 | 36.02 |
| Bra038698.1-P | Field mustard | extracellular | 22.29 | 35.94 |
| Solyc06g009900.1.1 | Tomato | nucleus | 22.62 | 35.81 |
| Bra004832.1-P | Field mustard | cytosol | 23.59 | 35.61 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 27.3 | 34.63 |
| CDY50571 | Canola | extracellular | 22.29 | 34.33 |
| KRH71929 | Soybean | nucleus | 23.26 | 33.96 |
| CDY42126 | Canola | cytosol | 14.22 | 33.59 |
| CDY17849 | Canola | plastid | 15.67 | 33.22 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 19.22 | 32.69 |
| EES15392 | Sorghum | nucleus | 15.51 | 32.54 |
| Solyc03g063280.2.1 | Tomato | nucleus | 23.42 | 31.59 |
| Bra023388.1-P | Field mustard | cytosol | 26.98 | 28.69 |
| CDX95603 | Canola | nucleus | 25.36 | 27.54 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 31.02 | 26.89 |
| Bra000353.1-P | Field mustard | nucleus | 22.94 | 26.74 |
| CDX83427 | Canola | nucleus | 22.78 | 26.55 |
| CDX91150 | Canola | nucleus | 28.27 | 25.62 |
| CDY00757 | Canola | cytosol | 23.91 | 21.02 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 5.17 | 20.25 |
| GSMUA_Achr11P... | Banana | plastid | 7.59 | 19.92 |
| Bra041089.1-P | Field mustard | cytosol | 9.53 | 19.67 |
| CDY45580 | Canola | mitochondrion | 9.85 | 18.26 |
| EER94188 | Sorghum | cytosol | 9.21 | 9.52 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | UniProt:A0A1B6QBH6 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom |
| InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 |
| InterPro:IPR005491 | EnsemblPlants:KXG35268 | ProteinID:KXG35268 | ProteinID:KXG35268.1 | ProteinID:KXG35272.1 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF2 | SMART:SM01191 | EnsemblPlantsGene:SORBI_3002G151500 | SUPFAM:SSF158639 |
| UniParc:UPI00081AB97B | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:45078870..45094722
Molecular Weight (calculated)
68715.3 Da
IEP (calculated)
7.384
GRAVY (calculated)
-0.790
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAFGRRYDR AALSDITNRS GQHQHVNYSY SPHPQVGSYK HDDAGCRMDT ADSEAQLAAN VMRNQYRPHI KCLEMQGSSE PSELNCRYNA RTEKNIVDSR
101: GAHSWLDANP EVYKMMQTSL ELLMSRSRKV HPPNLPDSTY GGELNKVTNS QVHGIAQPSD VHKMVQTPLE MEMLMSQSRN VWPPNLLGST YGGESASVAS
201: PQVDGIDDDL PPPNLNSTDM RGTEHVSGNG RAITPTSSHD TAQTAMEAQI HQLEQEAYCS VLRAFKAQSD TITWEKEGLI TELREELRVS DEEHRQLLNR
301: INNDDFTRSI SEWRSKGRFD ARAPNNPKPV YDPLSIHTTS ARKRQKTSQP LTASPAPSPP MHSQQVAAPT HPSSSTATKE VPPGPIGKRL KTGQKVPGGS
401: AVKSMSSSEG LSARRPHLNR YFPSCPAAEL SQAQTVNPLI GRKAMNRWPD DNNFYEVVIS DYNQETGLYA LVHDMNTSNE TWEWVDLKKM GQEDIRWQED
501: GSGIDPVMYL QSHGAQTRGA GKSTSHGGPK PVPGRRISFQ KNVSKKDFLP PQNVDETRSY NNINIFHTGS LIKVVKKIFS VTNPDPLEVE WAKKALQDQE
601: RSLVGAITRL AEASDVASG
101: GAHSWLDANP EVYKMMQTSL ELLMSRSRKV HPPNLPDSTY GGELNKVTNS QVHGIAQPSD VHKMVQTPLE MEMLMSQSRN VWPPNLLGST YGGESASVAS
201: PQVDGIDDDL PPPNLNSTDM RGTEHVSGNG RAITPTSSHD TAQTAMEAQI HQLEQEAYCS VLRAFKAQSD TITWEKEGLI TELREELRVS DEEHRQLLNR
301: INNDDFTRSI SEWRSKGRFD ARAPNNPKPV YDPLSIHTTS ARKRQKTSQP LTASPAPSPP MHSQQVAAPT HPSSSTATKE VPPGPIGKRL KTGQKVPGGS
401: AVKSMSSSEG LSARRPHLNR YFPSCPAAEL SQAQTVNPLI GRKAMNRWPD DNNFYEVVIS DYNQETGLYA LVHDMNTSNE TWEWVDLKKM GQEDIRWQED
501: GSGIDPVMYL QSHGAQTRGA GKSTSHGGPK PVPGRRISFQ KNVSKKDFLP PQNVDETRSY NNINIFHTGS LIKVVKKIFS VTNPDPLEVE WAKKALQDQE
601: RSLVGAITRL AEASDVASG
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.