Factsheet for Bra000353.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83427	Canola	nucleus	93.97	93.97
Bra004832.1-P	Field mustard	cytosol	48.21	62.44
AT2G44440.1	Thale cress	nucleus	48.59	60.14
KRH27522	Soybean	nucleus	38.04	46.33
VIT_13s0156g00360.t01	Wine grape	nucleus	36.53	44.8
Solyc01g073960.2.1	Tomato	nucleus	35.97	44.73
PGSC0003DMT400016200	Potato	nucleus	35.97	44.63
Solyc10g044960.1.1	Tomato	nucleus	36.16	44.44
Bra006175.1-P	Field mustard	nucleus	32.2	44.42
Bra008863.1-P	Field mustard	nucleus	32.58	43.91
KRH36382	Soybean	nucleus	37.48	42.34
KRH43436	Soybean	cytosol	34.84	42.14
KRH13882	Soybean	nucleus	34.27	42.03
Bra009226.1-P	Field mustard	cytosol	24.29	41.75
Os08t0328300-02	Rice	nucleus	34.09	39.52
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	24.29	38.62
PGSC0003DMT400053543	Potato	nucleus	28.25	38.07
Zm00001d019922_P003	Maize	nucleus	32.39	38.05
HORVU5Hr1G053150.1	Barley	nucleus, plastid	33.52	37.63
TraesCS5D01G177600.1	Wheat	nucleus	33.33	37.34
TraesCS5B01G170500.1	Wheat	nucleus	33.33	37.34
EES14911	Sorghum	nucleus	32.2	37.25
OQU89150	Sorghum	nucleus	31.64	37.0
TraesCS5A01G173100.1	Wheat	nucleus, plastid	32.77	36.71
Zm00001d005106_P005	Maize	mitochondrion	31.83	36.66
Solyc06g009900.1.1	Tomato	nucleus	26.93	36.57
Zm00001d050116_P003	Maize	nucleus	31.26	36.24
Bra038698.1-P	Field mustard	extracellular	25.42	35.16
Bra041089.1-P	Field mustard	cytosol	18.83	33.33
Os09t0279000-01	Rice	mitochondrion	32.39	33.33
Bra023388.1-P	Field mustard	cytosol	29.0	26.46
GSMUA_Achr11P...	Banana	plastid	10.55	23.73
KXG35268	Sorghum	mitochondrion, nucleus	26.74	22.94

Protein Annotations

Gene3D:1.10.1240.40	Gene3D:2.30.30.140	MapMan:35.1	EnsemblPlantsGene:Bra000353	EnsemblPlants:Bra000353.1	EnsemblPlants:Bra000353.1-P
InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	UniProt:M4C825	PFAM:PF03735	PFscan:PS51138
PANTHER:PTHR33432	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI000253FDC9	SEG:seg

Description

AT2G44440 (E=8e-118) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA03:-:10703006..10705726

Molecular Weight (calculated)

60073.7 Da

IEP (calculated)

7.333

GRAVY (calculated)

-0.744

Length

531 amino acids

Sequence
(BLAST)

001: MDYESFDSSG TDDDLPPSHR VVPRGGIVSS NGRPSTLAPS HMYDQVAADM EAQIHHVEKE AYFSLLRAFR AQADAITWEK DGLITEMRKE EWRQSGGVQR
101: HAAQVVHDTL PSPCVPASIK RHKPNQPIPS QPFASSSPPQ ADPTHQFASW TAKRGLVPNV KDKKHKPVLP GSSSLKPIPC HPLDQPPRGQ VMNNRLPSVP
201: TSSSEPAKGS GPESFVGRRV RTRWPEDNAF YEAAITKYDP VEGRHALVYD IGTRNETWEW VKLAEISPRD IEWIGEDPGV SNRYGLNRTT GPNNVPQRGS
301: GLAKTTIKND LRTSQNGAGK RKHVDIRIRP TNVLIREVER VLSSHNPDPQ EVEMAKRVLE EQEHALVGAI TKLGDISNGE NGNFAKAQCN ADHEELLKKK
401: KTLVEMERQS LDFFDALVTS HQTHSLLLED GAFCLEKLYM DVENQEWSRK TFKYPRQWEG FGWHLRSNGL IHTGELMVFQ RSLEEAKPFC VYYYDFNKER
501: SRKVEIRGVE TDELQGSRLC YPGYVENIRF L

Best Arabidopsis Sequence Match ( AT2G44440.1 )
(BLAST)

001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR

Arabidopsis Description

EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.