Factsheet for Bra001437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038698.1-P	Field mustard	extracellular	82.63	71.88
AT3G12140.3	Thale cress	cytosol	80.24	69.97
Bra009226.1-P	Field mustard	cytosol	63.47	68.61
KRH38126	Soybean	nucleus	60.18	60.36
Bra006175.1-P	Field mustard	nucleus	51.2	44.42
Bra008863.1-P	Field mustard	nucleus	51.8	43.91
KRH71929	Soybean	nucleus	55.39	43.63
GSMUA_Achr11P...	Banana	nucleus	32.63	43.43
CDY00757	Canola	cytosol	88.32	41.9
Os08t0328300-02	Rice	nucleus	52.4	38.21
OQU89150	Sorghum	nucleus	51.2	37.67
Zm00001d019922_P003	Maize	nucleus	50.6	37.39
HORVU5Hr1G053150.1	Barley	nucleus, plastid	51.2	36.15
TraesCS5D01G177600.1	Wheat	nucleus	50.6	35.65
TraesCS5A01G173100.1	Wheat	nucleus, plastid	50.6	35.65
Zm00001d005106_P005	Maize	mitochondrion	49.1	35.57
EES14911	Sorghum	nucleus	48.8	35.51
TraesCS5B01G170500.1	Wheat	nucleus	50.3	35.44
Zm00001d050116_P003	Maize	nucleus	47.9	34.93
Bra004832.1-P	Field mustard	cytosol	42.22	34.39
Solyc03g063280.2.1	Tomato	nucleus	47.01	34.2
Os09t0279000-01	Rice	mitochondrion	50.3	32.56
Bra023388.1-P	Field mustard	cytosol	50.6	29.04
PGSC0003DMT400046911	Potato	cytoskeleton, cytosol, nucleus	13.47	28.48
Bra000353.1-P	Field mustard	nucleus	38.62	24.29
Bra041089.1-P	Field mustard	cytosol	19.76	22.0
KXG35268	Sorghum	mitochondrion, nucleus	40.72	21.97

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	InterPro:Agenet_dom_plant	EnsemblPlantsGene:Bra001437	EnsemblPlants:Bra001437.1	EnsemblPlants:Bra001437.1-P
ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	UniProt:M4CB58	PFAM:PF03735
PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF7	SMART:SM00743	SMART:SM01191	SUPFAM:SSF158639
SUPFAM:SSF63748	UniParc:UPI0002540795	:	:	:	:

Description

AT3G12140 (E=4e-158) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA03:-:16376380..16377992

Molecular Weight (calculated)

37600.0 Da

IEP (calculated)

6.445

GRAVY (calculated)

-0.663

Length

334 amino acids

Sequence
(BLAST)

001: MEAQIHQLEQ EAYTAVLRAF KAQSDAISWD KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGGSQVLSRH AASQGFDVVP SPTFSASRKK
101: QKTFPSYHPS IGPAGNRSFN SRVVSGGIAG DGSAEALIGR KVWTKWPEDN HFYEAIITQY NAVEGRHALV YDINAINETW EWVDLKEIPP EDIRWDGEES
201: GVALNAGLGS GSIRGNRRNQ SHFGRGRGPR IHQPRREFLP PPTHQNGGGD DIELFNTDLL VKEVERVFDA THPDPFELDK AKKMLKEHEQ ALMAAIARLA
301: DTSDGEIGNN NRIKASFCLQ SQNTLFYLPF NCVL

Best Arabidopsis Sequence Match ( AT3G12140.3 )
(BLAST)

001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMGNNNKSTL RLVCNLRIIY YLPLNFCVMM IISSIITNLI LGKIIRELIH TCSACDFSVT CKQLNSLKYR SSS

Arabidopsis Description

EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.