Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 69.97 | 80.24 |
| CDX73835 | Canola | nucleus | 67.36 | 80.12 |
| Bra038698.1-P | Field mustard | extracellular | 68.15 | 67.97 |
| CDY50571 | Canola | extracellular | 68.93 | 65.67 |
| AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 54.31 | 65.0 |
| CDY42126 | Canola | cytosol | 44.13 | 64.5 |
| KRH38126 | Soybean | nucleus | 53.79 | 61.86 |
| KRH71929 | Soybean | nucleus | 49.35 | 44.58 |
| AT5G13020.1 | Thale cress | nucleus | 44.65 | 43.07 |
| GSMUA_Achr11P... | Banana | nucleus | 27.94 | 42.63 |
| Os08t0328300-02 | Rice | nucleus | 48.04 | 40.17 |
| OQU89150 | Sorghum | nucleus | 45.17 | 38.11 |
| Zm00001d019922_P003 | Maize | nucleus | 44.65 | 37.83 |
| EES14911 | Sorghum | nucleus | 44.91 | 37.47 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 45.95 | 37.21 |
| Zm00001d050116_P003 | Maize | nucleus | 44.39 | 37.12 |
| AT2G44440.1 | Thale cress | nucleus | 41.51 | 37.06 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 45.69 | 36.92 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 45.69 | 36.92 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 45.43 | 36.71 |
| Zm00001d005106_P005 | Maize | mitochondrion | 44.13 | 36.66 |
| CDY00757 | Canola | cytosol | 67.1 | 36.51 |
| Solyc03g063280.2.1 | Tomato | nucleus | 40.47 | 33.77 |
| Os09t0279000-01 | Rice | mitochondrion | 45.43 | 33.72 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 11.75 | 28.48 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 36.55 | 22.62 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | EntrezGene:820389 | UniProt:A0A178VB56 | ProteinID:AEE75157.1 | ArrayExpress:AT3G12140 |
| EnsemblPlantsGene:AT3G12140 | RefSeq:AT3G12140 | TAIR:AT3G12140 | RefSeq:AT3G12140-TAIR-G | EnsemblPlants:AT3G12140.3 | TAIR:AT3G12140.3 |
| InterPro:Agenet_dom_plant | ProteinID:BAB01962.1 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf |
| GO:GO:0005575 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0050832 | InterPro:IPR005491 | RefSeq:NP_001030677.1 | ProteinID:OAP02213.1 | PFAM:PF03735 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51138 | PANTHER:PTHR33432 |
| PANTHER:PTHR33432:SF7 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 | TMHMM:TMhelix |
| UniParc:UPI00000A1243 | SEG:seg | : | : | : | : |
Description
EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
Coordinates
chr3:-:3868822..3871732
Molecular Weight (calculated)
43321.1 Da
IEP (calculated)
7.377
GRAVY (calculated)
-0.589
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMGNNNKSTL RLVCNLRIIY YLPLNFCVMM IISSIITNLI LGKIIRELIH TCSACDFSVT CKQLNSLKYR SSS
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMGNNNKSTL RLVCNLRIIY YLPLNFCVMM IISSIITNLI LGKIIRELIH TCSACDFSVT CKQLNSLKYR SSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.