Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 67.08 | 69.45 |
| CDY50571 | Canola | extracellular | 85.4 | 68.41 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 59.32 | 67.73 |
| AT3G12140.3 | Thale cress | cytosol | 80.12 | 67.36 |
| CDY42126 | Canola | cytosol | 54.04 | 66.41 |
| KRH38126 | Soybean | nucleus | 63.04 | 60.96 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 17.39 | 45.53 |
| KRH71929 | Soybean | nucleus | 58.7 | 44.58 |
| CDX70488 | Canola | nucleus | 53.11 | 44.53 |
| CDX78501 | Canola | nucleus | 52.8 | 43.81 |
| CDY00757 | Canola | cytosol | 95.65 | 43.75 |
| GSMUA_Achr11P... | Banana | nucleus | 33.85 | 43.43 |
| CDX85675 | Canola | nucleus | 52.17 | 42.97 |
| CDX69677 | Canola | nucleus | 54.35 | 42.37 |
| CDX97218 | Canola | nucleus | 54.35 | 42.37 |
| Os08t0328300-02 | Rice | nucleus | 53.42 | 37.55 |
| Zm00001d019922_P003 | Maize | nucleus | 52.48 | 37.39 |
| OQU89150 | Sorghum | nucleus | 52.17 | 37.0 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 53.11 | 36.15 |
| EES14911 | Sorghum | nucleus | 50.93 | 35.73 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 52.48 | 35.65 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 52.48 | 35.65 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 52.17 | 35.44 |
| Zm00001d050116_P003 | Maize | nucleus | 50.31 | 35.37 |
| Zm00001d005106_P005 | Maize | mitochondrion | 50.62 | 35.36 |
| CDY68247 | Canola | nucleus | 43.48 | 35.18 |
| Solyc03g063280.2.1 | Tomato | nucleus | 49.38 | 34.64 |
| CDY17849 | Canola | plastid | 31.06 | 34.25 |
| Os09t0279000-01 | Rice | mitochondrion | 51.55 | 32.17 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 14.91 | 30.38 |
| CDX95603 | Canola | nucleus | 47.52 | 26.84 |
| CDX91150 | Canola | nucleus | 53.42 | 25.18 |
| CDX83427 | Canola | nucleus | 40.99 | 24.86 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 42.24 | 21.97 |
| CDY45580 | Canola | mitochondrion | 21.43 | 20.66 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | InterPro:Agenet_dom_plant | EnsemblPlants:CDX73835 | ProteinID:CDX73835 | ProteinID:CDX73835.1 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00111536001 | InterPro:IPR005491 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF7 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI0004EF1AAF | : | : | : | : |
Description
BnaA03g32120D
Coordinates
chrLK031800:+:145340..147657
Molecular Weight (calculated)
36177.0 Da
IEP (calculated)
5.908
GRAVY (calculated)
-0.765
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQIHQLEQ EAYTAVLRAF KAQSDAISWD KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGGSQVLSRH AASQGFDVVP SPTFSASRKK
101: QKTFPSYHPS IGPAGNRSFN SRVVSGGIAA DGSAEALIGR KVWTKWPEDN HFYEAIITQY NAVEGRHALV YDINAINETW EWVDLKEIPP EDIRWDGEES
201: GVALNAGLGS GSIRGNRRNQ SHFGRGRGPR IHQPRREFLP PPTHQNGGGD DIELFNTDLL VKEVERVFDA THPDPFELDK AKKMLKEHEQ ALMAAIARLA
301: DTSDGEIEGD PPYSHDHAMQ QG
101: QKTFPSYHPS IGPAGNRSFN SRVVSGGIAA DGSAEALIGR KVWTKWPEDN HFYEAIITQY NAVEGRHALV YDINAINETW EWVDLKEIPP EDIRWDGEES
201: GVALNAGLGS GSIRGNRRNQ SHFGRGRGPR IHQPRREFLP PPTHQNGGGD DIELFNTDLL VKEVERVFDA THPDPFELDK AKKMLKEHEQ ALMAAIARLA
301: DTSDGEIEGD PPYSHDHAMQ QG
001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
Arabidopsis Description
EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.