Factsheet for GSMUA_Achr11P10080_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P10190_001
GSMUA_Achr3P12880_001
GSMUA_Achr3P28020_001
GSMUA_Achr3P28160_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr7P01890_001
GSMUA_Achr9P22660_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06780.1	GSMUA_Achr3P12880_001	AT1G19010.1	21798944
AT5G06780.1	GSMUA_Achr3P28160_001	AT1G19010.1	21798944
AT5G06780.1	GSMUA_Achr9P22660_001	AT1G19010.1	21798944
AT5G06780.1	GSMUA_Achr1P10190_001	AT4G30490.1	21798944
AT5G06780.1	GSMUA_Achr3P28020_001	AT4G30490.1	21798944
AT5G06780.1	GSMUA_Achr4P20870_001	AT5G65683.1	21798944
AT5G06780.1	GSMUA_Achr4P22090_001	AT5G65683.1	21798944
AT5G06780.1	GSMUA_Achr5P14740_001	AT5G65683.1	21798944
AT5G06780.1	GSMUA_Achr7P01890_001	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70068	Canola	cytoskeleton, cytosol, nucleus	44.22	39.36
Bra009226.1-P	Field mustard	cytosol	44.22	35.92
KRH38126	Soybean	nucleus	46.22	34.83
CDX73835	Canola	nucleus	43.43	33.85
GSMUA_AchrUn_...	Banana	nucleus	51.39	33.51
CDX98955	Canola	cytoskeleton, cytosol, nucleus	41.04	33.12
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	43.43	32.63
Os08t0328300-02	Rice	nucleus	59.36	32.53
GSMUA_Achr4P13240_001	Banana	nucleus	62.15	31.9
GSMUA_Achr8P04620_001	Banana	cytosol	23.51	31.38
OQU89150	Sorghum	nucleus	56.57	31.28
EES14911	Sorghum	nucleus	55.38	30.28
Zm00001d019922_P003	Maize	nucleus	54.18	30.09
CDY42126	Canola	cytosol	31.08	29.77
TraesCS5D01G177600.1	Wheat	nucleus	54.98	29.11
Zm00001d005106_P005	Maize	mitochondrion	53.39	29.07
HORVU5Hr1G053150.1	Barley	nucleus, plastid	54.58	28.96
AT5G06780.1	Thale cress	cytoskeleton, cytosol, nucleus	36.65	28.75
TraesCS5B01G170500.1	Wheat	nucleus	54.18	28.69
TraesCS5A01G173100.1	Wheat	nucleus, plastid	54.18	28.69
Zm00001d050116_P003	Maize	nucleus	51.39	28.17
Bra038698.1-P	Field mustard	extracellular	43.03	28.12
AT3G12140.3	Thale cress	cytosol	42.63	27.94
KRH71929	Soybean	nucleus	45.42	26.89
CDY50571	Canola	extracellular	43.03	26.87
GSMUA_Achr3P11710_001	Banana	nucleus	51.79	26.64
Solyc03g063280.2.1	Tomato	nucleus	48.21	26.36
Os09t0279000-01	Rice	mitochondrion	54.18	26.36
GSMUA_Achr4P11340_001	Banana	cytosol	32.67	22.53
GSMUA_Achr7P06400_001	Banana	cytosol	63.35	22.27
KXG35268	Sorghum	mitochondrion, nucleus	49.4	20.03
CDY00757	Canola	cytosol	48.21	17.19
GSMUA_Achr8P04630_001	Banana	nucleus	7.17	8.41
GSMUA_Achr11P...	Banana	plastid	2.79	2.97
PGSC0003DMT400046911	Potato	cytoskeleton, cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf
GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	EnsemblPlantsGene:GSMUA_Achr11G10080_001
EnsemblPlants:GSMUA_Achr11P10080_001	EnsemblPlants:GSMUA_Achr11T10080_001	InterPro:IPR005491	UniProt:M0RQY8	PFAM:PF03735	PFscan:PS51138
PANTHER:PTHR33432	PANTHER:PTHR33432:SF7	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI0002960C99

Description

ENT domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G10080_001]

Coordinates

chr11:+:7905692..7908010

Molecular Weight (calculated)

27791.3 Da

IEP (calculated)

6.424

GRAVY (calculated)

-0.755

Length

251 amino acids

Sequence
(BLAST)

001: MDYGPTDSSG TDDDLPPFLH NRGGPVTGSG KTTAAAPPCS RMQNDMESVI HQLEQEAYCS VLRAFKAQSD AISWEKEGLI TELRKELRLS NEEHRELLRR
101: VNTDDIIHRI REWRQEGGGQ SNLINNAQSI HDLVPSPSGS ASKKRQKTSN SAASLPGGYL PKLHSQPGAA SMHPSASTVR KGNTFSSTKP GEAAANASLI
201: GRKIMTRWPD DNNFYEAVII DYKPREGLHA LVYDIHTDNE TWEWVNLNEV N

Best Arabidopsis Sequence Match ( AT5G13020.3 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.