Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94907 | Soybean | cytosol | 20.09 | 13.52 |
| GSMUA_Achr11P... | Banana | plastid | 14.02 | 12.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.43 | 12.47 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 20.56 | 12.09 |
| VIT_08s0056g01450.t01 | Wine grape | cytosol, mitochondrion, nucleus | 13.08 | 10.89 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 24.77 | 10.86 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 23.36 | 10.22 |
| GSMUA_Achr8P04620_001 | Banana | cytosol | 6.54 | 7.45 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 24.77 | 7.42 |
| GSMUA_Achr11P... | Banana | nucleus | 8.41 | 7.17 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P04630_001 | EnsemblPlants:GSMUA_Achr8T04630_001 | EnsemblPlantsGene:GSMUA_Achr8G04630_001 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | UniParc:UPI000295B22C |
| UniProt:M0TML6 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04630_001]
Coordinates
chr8:+:3075602..3080536
Molecular Weight (calculated)
23256.3 Da
IEP (calculated)
6.949
GRAVY (calculated)
-0.703
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQRFDYSK TAAESSWEPG GALQLEQKIE DSAKAKSCSV HKGFDEDVEG ISGGECHGQT SKQGKHARDD QLGRKGTLFS PQSNGQALGP VNPNVQPNKV
101: KARGSLIVQA SKKGFVHSGV DILKPGSDII EILATDKLIH EVERVCGGEN PEPALVQRAK LILKDHERAL LEAIGKLADV SDGDDSPDRI QYMIQEPQSR
201: AHVFPNNRSR SHCK
101: KARGSLIVQA SKKGFVHSGV DILKPGSDII EILATDKLIH EVERVCGGEN PEPALVQRAK LILKDHERAL LEAIGKLADV SDGDDSPDRI QYMIQEPQSR
201: AHVFPNNRSR SHCK
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.