Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 31.38 | 23.51 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 34.57 | 13.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.6 | 12.99 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 25.0 | 12.91 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 29.26 | 11.27 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 36.17 | 9.52 |
| TraesCS1B01G155200.1 | Wheat | nucleus | 26.06 | 7.92 |
| Os10t0436850-00 | Rice | plasma membrane | 22.34 | 7.42 |
| TraesCS1D01G192300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 23.94 | 7.22 |
| Zm00001d032901_P001 | Maize | nucleus | 25.0 | 6.9 |
| EER94188 | Sorghum | cytosol | 21.81 | 6.84 |
| GSMUA_Achr8P04630_001 | Banana | nucleus | 7.45 | 6.54 |
| GSMUA_Achr11P... | Banana | plastid | 5.32 | 4.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P04620_001 | EnsemblPlants:GSMUA_Achr8T04620_001 | EnsemblPlantsGene:GSMUA_Achr8G04620_001 | Gene3D:1.10.1240.40 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf |
| InterPro:IPR005491 | PANTHER:PTHR33432 | PFAM:PF03735 | PFscan:PS51138 | SMART:SM01191 | SUPFAM:SSF158639 |
| UniParc:UPI0002952B9B | UniProt:M0TML5 | MapMan:35.1 | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_56.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G04620_001]
Coordinates
chr8:+:3067252..3069389
Molecular Weight (calculated)
20551.6 Da
IEP (calculated)
5.619
GRAVY (calculated)
-0.209
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYVKNDSSG TDDDLPNPGI IRASKGLACS GIMAIASGPM SSDKDLRDME FQVHCIEIEA YSAVLRAFIA QSNDLSWGKE ELISELRKEL RVSDVEHREI
101: LGKVHSDDSI KFLRESLKNA EAQLAAMNPP PLGPNSMGHV PCKKLKQGHM TVSASPQYLT YAQPSSTAVQ LPAVSYDGPF VVFCLIKI
101: LGKVHSDDSI KFLRESLKNA EAQLAAMNPP PLGPNSMGHV PCKKLKQGHM TVSASPQYLT YAQPSSTAVQ LPAVSYDGPF VVFCLIKI
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.