Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G192300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 55.57 | 55.22 |
| Os10t0436850-00 | Rice | plasma membrane | 26.01 | 28.45 |
| GSMUA_Achr8P04620_001 | Banana | cytosol | 7.92 | 26.06 |
| EER94188 | Sorghum | cytosol | 22.94 | 23.71 |
| VIT_08s0056g01450.t01 | Wine grape | cytosol, mitochondrion, nucleus | 8.08 | 19.46 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 12.6 | 16.46 |
| TraesCS5B01G266000.1 | Wheat | nucleus | 10.34 | 16.33 |
| KRG94907 | Soybean | cytosol | 7.92 | 15.41 |
| Zm00001d032901_P001 | Maize | nucleus | 15.51 | 14.1 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G155200.1 | EnsemblPlantsGene:TraesCS1B01G155200 | Gene3D:1.10.1240.40 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | InterPro:IPR005491 |
| PANTHER:PTHR33432 | PFAM:PF03735 | PFscan:PS51138 | SEG:seg | SMART:SM01191 | SUPFAM:SSF158639 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:262091970..262096371
Molecular Weight (calculated)
68109.0 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.481
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGLVYSRRK QAVQESTHIV GPPDDRASLN KANIRNTEVR GQVYSHNKRA GQESTHSVST SHGSARLNSL VYSRRKQAGQ ESTHDLGGGV GTPHDSASLN
101: KGSIQNTGVR EDSVVTACVV PDAGDTAFQI HCLRRSAYAA VLRAFYAQSD LLSRAKQECL ARLRNELKIS DTEHREYVVK ASTNKHIKSL SAWSKGNIGN
201: AEVAKESLDL KCVIPDAGDA SFQTHCLERS AYASVLRAFY AQSDLLLWAR LLTKLRNELR LSYMEHREVI ARVSSNEYIK SLRKFSLVNY SGLMKKTPAF
301: DLHAVVADKI DKTGQYFTSL VPQSPTPAHM MSPARDIGIL GISYSTTKGS CFDPNATVPA KKLKSGSGSA LAYFKCSPCA EPLPESVSSV RTGSPKHDLL
401: DSSKKSPCAM KTGCAVSPMF QEKHNQTNAG DVPWCFHKDT EVPRKRGTEV SPVSRSKSLS VITYSAGNID HDSDIIKILL TCGLVNKVEE LFKVKPDPAS
501: LQTARLILKD QEIHLLDALA KLSEVSSASE VNQHDEVKGD PVSYDEAPTS PITELRRAET EGETEGTQGR RELEPAAKRA RRTTVRLSGA EWVKCLSRKR
601: KKRTGRMRPT LLRTVFSLV
101: KGSIQNTGVR EDSVVTACVV PDAGDTAFQI HCLRRSAYAA VLRAFYAQSD LLSRAKQECL ARLRNELKIS DTEHREYVVK ASTNKHIKSL SAWSKGNIGN
201: AEVAKESLDL KCVIPDAGDA SFQTHCLERS AYASVLRAFY AQSDLLLWAR LLTKLRNELR LSYMEHREVI ARVSSNEYIK SLRKFSLVNY SGLMKKTPAF
301: DLHAVVADKI DKTGQYFTSL VPQSPTPAHM MSPARDIGIL GISYSTTKGS CFDPNATVPA KKLKSGSGSA LAYFKCSPCA EPLPESVSSV RTGSPKHDLL
401: DSSKKSPCAM KTGCAVSPMF QEKHNQTNAG DVPWCFHKDT EVPRKRGTEV SPVSRSKSLS VITYSAGNID HDSDIIKILL TCGLVNKVEE LFKVKPDPAS
501: LQTARLILKD QEIHLLDALA KLSEVSSASE VNQHDEVKGD PVSYDEAPTS PITELRRAET EGETEGTQGR RELEPAAKRA RRTTVRLSGA EWVKCLSRKR
601: KKRTGRMRPT LLRTVFSLV
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.