Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G274200.1 | Wheat | nucleus | 99.23 | 99.23 |
| TraesCS5A01G266400.1 | Wheat | nucleus | 98.98 | 98.98 |
| HORVU5Hr1G073510.5 | Barley | nucleus | 93.88 | 93.88 |
| EER96978 | Sorghum | nucleus | 73.21 | 72.84 |
| Os04t0659400-01 | Rice | nucleus | 73.72 | 72.25 |
| Zm00001d020946_P005 | Maize | nucleus | 65.56 | 67.63 |
| Zm00001d006030_P001 | Maize | cytosol | 64.29 | 49.9 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 44.39 | 36.71 |
| TraesCS1B01G155200.1 | Wheat | nucleus | 16.33 | 10.34 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G266000.1 | EnsemblPlantsGene:TraesCS5B01G266000 | Gene3D:1.10.1240.40 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | InterPro:IPR005491 |
| ncoils:Coil | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF1 | PFAM:PF03735 | PFscan:PS51138 | SEG:seg |
| SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 | TIGR:cd04508 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:+:450660669..450664415
Molecular Weight (calculated)
43306.1 Da
IEP (calculated)
6.385
GRAVY (calculated)
-0.937
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPMGYRPYD SSGTDDDLPS SQNRGLRGRS FSGNGRASAG PFPYARPHND LESQVHLVEQ EAYTGVLRAF KVQSDALSWE KESLISELRK ELRVSDEEHR
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDSWGPSGPL LNRNQNNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPNMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEALMGS GGDHTGRNGI AC
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDSWGPSGPL LNRNQNNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPNMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEALMGS GGDHTGRNGI AC
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.