Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G274200.1 | Wheat | nucleus | 99.74 | 99.74 |
| TraesCS5B01G266000.1 | Wheat | nucleus | 98.98 | 98.98 |
| HORVU5Hr1G073510.5 | Barley | nucleus | 94.39 | 94.39 |
| EER96978 | Sorghum | nucleus | 73.21 | 72.84 |
| Os04t0659400-01 | Rice | nucleus | 73.47 | 72.0 |
| Zm00001d020946_P005 | Maize | nucleus | 65.31 | 67.37 |
| Zm00001d006030_P001 | Maize | cytosol | 64.03 | 49.7 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 43.88 | 36.29 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G266400.1 | EnsemblPlantsGene:TraesCS5A01G266400 | Gene3D:1.10.1240.40 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | InterPro:IPR005491 |
| ncoils:Coil | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF1 | PFAM:PF03735 | PFscan:PS51138 | SEG:seg |
| SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 | TIGR:cd04508 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:+:477997389..478001035
Molecular Weight (calculated)
43265.1 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.943
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPMGYRPYD SSGTDDDLPS SQNRGLRGRS FSGNGRASAG PFPYARPHND LESQVHLVEQ EAYTGVLRAF KVQSDALSWE KESLISELRK ELRVSDEEHR
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDGWGPSGPL LNRNQSNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPSMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEARMGS GGDHTGRNGI AC
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDGWGPSGPL LNRNQSNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPSMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEARMGS GGDHTGRNGI AC
001: MVGLHINMEA QIHILEQEAY SAVLRAFQAQ ADEFSWDKAT VMTNLRKELR ISDDENRQLL NNVHNDDLIK RIRDSRPRGG NQVVRHQSLD VHPSPTFSAS
101: RKKQKTFQSY PSIGSTRSKS FNNRVVSANE PAEALIGRKV WTKWPEDNSF YEAVVTQYNA NEGRHALVYD INTVNETWEW VDLNEIPTKD IRWDGEEDGV
201: TLNVGHGGGT TRGNRRTLSH GGRGRGPRTQ PRREHLATEN GGGRKFFGEI ELFNTDSLVK EVERVFDSNL PDPHELDKAK KLLKEHEQAL IAAIARLTDA
301: SDYESDGEEP YSHELPMLLG
101: RKKQKTFQSY PSIGSTRSKS FNNRVVSANE PAEALIGRKV WTKWPEDNSF YEAVVTQYNA NEGRHALVYD INTVNETWEW VDLNEIPTKD IRWDGEEDGV
201: TLNVGHGGGT TRGNRRTLSH GGRGRGPRTQ PRREHLATEN GGGRKFFGEI ELFNTDSLVK EVERVFDSNL PDPHELDKAK KLLKEHEQAL IAAIARLTDA
301: SDYESDGEEP YSHELPMLLG
Arabidopsis Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Source:TAIR;Acc:AT5G06780]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.