Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G266400.1 | Wheat | nucleus | 99.74 | 99.74 |
| TraesCS5B01G266000.1 | Wheat | nucleus | 99.23 | 99.23 |
| HORVU5Hr1G073510.5 | Barley | nucleus | 94.64 | 94.64 |
| EER96978 | Sorghum | nucleus | 73.47 | 73.1 |
| Os04t0659400-01 | Rice | nucleus | 73.72 | 72.25 |
| Zm00001d020946_P005 | Maize | nucleus | 65.56 | 67.63 |
| Zm00001d006030_P001 | Maize | cytosol | 64.29 | 49.9 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 44.64 | 36.92 |
| TraesCS1D01G192300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 14.03 | 8.83 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G274200.1 | EnsemblPlantsGene:TraesCS5D01G274200 | Gene3D:1.10.1240.40 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0050832 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | InterPro:IPR005491 |
| ncoils:Coil | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF1 | PFAM:PF03735 | PFscan:PS51138 | SEG:seg |
| SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 | TIGR:cd04508 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5D:+:377356717..377360984
Molecular Weight (calculated)
43292.1 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.950
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPMGYRPYD SSGTDDDLPS SQNRGLRGRS FSGNGRASAG PFPYARPHND LESQVHLVEQ EAYTGVLRAF KVQSDALSWE KESLISELRK ELRVSDEEHR
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDGWGPSGPL LNRNQSNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPNMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEARMGS GGDHTGRNGI AC
101: ELLNKVNEDG AIRGMRELRQ GGGTPSGLHR GSRVLHDGEP GPTAKRQRPS HLMPSHSSGL QSPVMSSHSV PSSSKWGPSS ASRGKRAKST TPLALPSMDP
201: TSLISRKVFT RWPDDNNFYE ATITRYNPAT GEHALVYDMG KTTESWESVR LCDMRPEDIR WERDDQGISN RDGWGPSGPL LNRNQSNNGR GRLSQNEHPN
301: KYGPPQNGIN RNIGEIDVPN TQSVVIEVER VLSNPNMHEI EKAKKLLTDQ EQSLLDAIAS LDDASDSESE DKAMEARMGS GGDHTGRNGI AC
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.