Factsheet for Os04t0659400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G073510.5	Barley	nucleus	72.25	73.72
TraesCS5B01G266000.1	Wheat	nucleus	72.25	73.72
TraesCS5D01G274200.1	Wheat	nucleus	72.25	73.72
TraesCS5A01G266400.1	Wheat	nucleus	72.0	73.47
EER96978	Sorghum	nucleus	69.25	70.3
Zm00001d020946_P005	Maize	nucleus	64.25	67.63
Os08t0510500-01	Rice	nucleus	35.25	51.84
Zm00001d006030_P001	Maize	cytosol	61.25	48.51
Os08t0328300-02	Rice	nucleus	49.0	42.79
Os09t0279000-01	Rice	mitochondrion	48.0	37.21
Os10t0436850-00	Rice	plasma membrane	14.25	10.07

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	EntrezGene:4337275	EMBL:AK070174	ProteinID:BAF16050.1	ProteinID:BAS91436.1
ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	EnsemblPlantsGene:Os04g0659400	EnsemblPlants:Os04t0659400-01
PFAM:PF03735	PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF1	UniProt:Q0J9D7	SMART:SM01191
SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI0000DD9308	RefSeq:XP_015635324.1	SEG:seg	:

Description

ENT domain containing protein. (Os04t0659400-01)

Coordinates

chr4:+:33645186..33649308

Molecular Weight (calculated)

44084.4 Da

IEP (calculated)

6.449

GRAVY (calculated)

-0.776

Length

400 amino acids

Sequence
(BLAST)

001: MKAMGYNNPY DSSGTDDDLP PTQNRGLRVR SFSANGRASV MPFSYIRPHG DLESEIHQVE QEAYTGVLRA FKVQSDAISW EKESLITELR KELRVSDDEH
101: RELLNKVNED VAIRRMREFR QGGGSLSAQH RGSRIFHDTE PGPAAKRQRT PLSIPSHSAG LQSPAMPSPS VPSSTKWGPF SGTKGKKTRT NTPLAVPSAD
201: PTSLINRKIY TRWPDDNNFY EATITDYNPA TGKHALVYDM GTVAQTWESV RLSDLAPEDI IWDLDDQGIS NRDGWGPHPG MRRHPGNNGT MAMASRGGGR
301: FSRNEPTKDS APPQNGINRN IGHIDVPNTR SVVIEVERVL SNPNMGEIEK AKKLLQDQEQ SLLDAIARLD DASDSESEDM AVGAQMVSAG DHMGRNGVAC

Best Arabidopsis Sequence Match ( AT5G13020.1 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.