Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
19502382
plasma membrane: 28056797 |
msms PMID:
19502382
doi
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G155200.1 | Wheat | nucleus | 28.45 | 26.01 |
EER94188 | Sorghum | cytosol | 26.68 | 25.21 |
TraesCS1D01G192300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 26.33 | 23.92 |
GSMUA_Achr8P04620_001 | Banana | cytosol | 7.42 | 22.34 |
VIT_08s0056g01450.t01 | Wine grape | cytosol, mitochondrion, nucleus | 8.83 | 19.46 |
Os08t0510500-01 | Rice | nucleus | 8.13 | 16.91 |
KRG94907 | Soybean | cytosol | 9.01 | 16.04 |
Os08t0328300-02 | Rice | nucleus | 12.54 | 15.5 |
Os04t0659400-01 | Rice | nucleus | 10.07 | 14.25 |
Os09t0279000-01 | Rice | mitochondrion | 11.48 | 12.6 |
Zm00001d032901_P001 | Maize | nucleus | 15.02 | 12.48 |
Protein Annotations
Gene3D:1.10.1240.40 | MapMan:35.2 | UniProt:A0A0P0XUK0 | ProteinID:BAT10992.1 | InterPro:ENT_dom | InterPro:ENT_dom-like_sf |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003955 | GO:GO:0005488 | GO:GO:0006950 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0010181 | GO:GO:0016491 |
GO:GO:0050832 | GO:GO:0055114 | InterPro:IPR005491 | EnsemblPlantsGene:Os10g0436850 | EnsemblPlants:Os10t0436850-00 | PFAM:PF03735 |
PFscan:PS51138 | SMART:SM01191 | SUPFAM:SSF158639 | UniParc:UPI0003938C1D | SEG:seg | : |
Description
EMSY N-terminal domain containing protein. (Os10t0436850-00)
Coordinates
chr10:+:15605606..15609755
Molecular Weight (calculated)
62120.5 Da
IEP (calculated)
7.880
GRAVY (calculated)
-0.508
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTLELASAI PEAGDEAFQI HRLKRSAYAA VLRAFYAQPD LLSGAKEGSL AKLRSEFTIF DTEHREYLMK AISGSQSLSV GLNKASICNI EVTKDSLDLV
101: PMITDAQDTA FQIHCLERSA YASVLRAFFA QSELLSRSQA KLLTELRKKL RISDAELREV LMNVTSNEYI KSLRNCSLAN NSGLKDPTFD ARAMVPDKLV
201: KDGQSFTSFT NCISLSQESQ ISPRSMLSVR SVDILRSSHR TKKGPCLYPH AIVPAKKYSG NEYTLSYLKS SPAEQLPVAV SSVQVKRSTD DPLDTKTLPC
301: EVKTGCTLSP IQLKHIQANA GHVPLCIHQD MKASMKRKTE VPEVTGSKSL TVIVSTAGNI EHDFDIMKLD LTANLLSKVE QLFREKPNPD DLETAKAILK
401: EQEKVLLDAV LKLSEVSYVE ECFSTNCQPD EFNQHYEYES DDEMPQKTAS TNDAETPPKP VSPSDKEAPP QPVPGRGGGA TSKGKAKPRD SGRSSGGGSG
501: SGGRLDAADD QPTSASTCTS SSTLSPRSER EGEAKAQRAR GRVFEPPAKR ARRPSVRLSR SEWLWW
101: PMITDAQDTA FQIHCLERSA YASVLRAFFA QSELLSRSQA KLLTELRKKL RISDAELREV LMNVTSNEYI KSLRNCSLAN NSGLKDPTFD ARAMVPDKLV
201: KDGQSFTSFT NCISLSQESQ ISPRSMLSVR SVDILRSSHR TKKGPCLYPH AIVPAKKYSG NEYTLSYLKS SPAEQLPVAV SSVQVKRSTD DPLDTKTLPC
301: EVKTGCTLSP IQLKHIQANA GHVPLCIHQD MKASMKRKTE VPEVTGSKSL TVIVSTAGNI EHDFDIMKLD LTANLLSKVE QLFREKPNPD DLETAKAILK
401: EQEKVLLDAV LKLSEVSYVE ECFSTNCQPD EFNQHYEYES DDEMPQKTAS TNDAETPPKP VSPSDKEAPP QPVPGRGGGA TSKGKAKPRD SGRSSGGGSG
501: SGGRLDAADD QPTSASTCTS SSTLSPRSER EGEAKAQRAR GRVFEPPAKR ARRPSVRLSR SEWLWW
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEVIMISVFL LV
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.