Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG94907 | Soybean | cytosol | 28.02 | 22.64 |
VIT_13s0156g00360.t01 | Wine grape | nucleus | 30.35 | 18.01 |
VIT_06s0004g01350.t01 | Wine grape | nucleus | 30.74 | 16.63 |
VIT_08s0007g06350.t01 | Wine grape | nucleus | 29.96 | 15.94 |
GSMUA_Achr8P04630_001 | Banana | nucleus | 10.89 | 13.08 |
Os10t0436850-00 | Rice | plasma membrane | 19.46 | 8.83 |
TraesCS1D01G192300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 19.84 | 8.19 |
TraesCS1B01G155200.1 | Wheat | nucleus | 19.46 | 8.08 |
EER94188 | Sorghum | cytosol | 17.9 | 7.68 |
Zm00001d032901_P001 | Maize | nucleus | 17.9 | 6.75 |
Protein Annotations
Gene3D:1.10.1240.40 | MapMan:35.1 | EMBL:AM464725 | ProteinID:CAN65824 | ProteinID:CAN65824.1 | ProteinID:CCB56011 |
ProteinID:CCB56011.1 | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | UniProt:F6HMM9 | EMBL:FN595995 |
GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:IPR005491 |
PFAM:PF03735 | PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF13 | SMART:SM01191 | SUPFAM:SSF158639 |
UniParc:UPI000210881A | ArrayExpress:VIT_08s0056g01450 | EnsemblPlantsGene:VIT_08s0056g01450 | EnsemblPlants:VIT_08s0056g01450.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:2311470..2324697
Molecular Weight (calculated)
28598.2 Da
IEP (calculated)
10.011
GRAVY (calculated)
-0.680
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYTGHNALG TCKGLQMQRT NSSRCHRAYG STKMARVKES HGRDNMDVTC EIHRMEMEAY NAVLRAFIAQ SSVLSWGKEG LITELRKELN VTDIEHRELL
101: MKIDSNESIR MIREWRKGTS YAQEPPPSKM NTAGIVPSSE RYAAQKKLKT SHTSVPMSQK YISHGQPSSP ADPASVPAKL KDGENHRELV VFSSGNAGLP
201: MNAVGHKIQA PSSIKGRATG ASQTKMAFHA PDGGNFKKRY DLIEIRETDK LIQEKIV
101: MKIDSNESIR MIREWRKGTS YAQEPPPSKM NTAGIVPSSE RYAAQKKLKT SHTSVPMSQK YISHGQPSSP ADPASVPAKL KDGENHRELV VFSSGNAGLP
201: MNAVGHKIQA PSSIKGRATG ASQTKMAFHA PDGGNFKKRY DLIEIRETDK LIQEKIV
001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
Arabidopsis Description
EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.