Factsheet for Zm00001d006030_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96978	Sorghum	nucleus	64.16	82.23
Zm00001d020946_P005	Maize	nucleus	61.19	81.32
TraesCS5B01G266000.1	Wheat	nucleus	49.9	64.29
TraesCS5D01G274200.1	Wheat	nucleus	49.9	64.29
TraesCS5A01G266400.1	Wheat	nucleus	49.7	64.03
HORVU5Hr1G073510.5	Barley	nucleus	49.51	63.78
Os04t0659400-01	Rice	nucleus	48.51	61.25
Zm00001d052893_P002	Maize	nucleus	26.53	42.14
Zm00001d019922_P003	Maize	nucleus	32.28	36.06
Zm00001d050116_P003	Maize	nucleus	32.28	35.59
Zm00001d005106_P005	Maize	mitochondrion	31.68	34.71
Zm00001d032901_P001	Maize	nucleus	11.88	8.81

Protein Annotations

Gene3D:1.10.1240.40	EntrezGene:100284072	MapMan:35.1	UniProt:A0A1D6ES47	ncoils:Coil	InterPro:EMSY-LIKE_plant
InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0050832	InterPro:IPR005491	ProteinID:ONM22567.1	PFAM:PF03735	PFscan:PS51138	PANTHER:PTHR33432
PANTHER:PTHR33432:SF1	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI00084528A8	EnsemblPlantsGene:Zm00001d006030
EnsemblPlants:Zm00001d006030_P001	EnsemblPlants:Zm00001d006030_T001	SEG:seg	:	:	:

Description

ENT domain containing protein

Coordinates

chr2:+:195706441..195714239

Molecular Weight (calculated)

55885.3 Da

IEP (calculated)

9.002

GRAVY (calculated)

-0.568

Length

505 amino acids

Sequence
(BLAST)

001: MLMEASKVES AWASRPSDGL NWKRESVTRR RQAPVGLRLR LSANMDKGVA PAVSMLDSKL VAVAPAAVGV AVSYRQRTRW CLDPAGVLQV LTVRLSRCFR
101: RGYEGGGIQP LRQQRIGSSP FIVGTDDDLP PAQNRGLRGR SFSGNVVASA GAFPYMRANN DLESEIHRVE QDAYTGILRA FKVQSDAISW EKESLITELR
201: KELRVSDEEH RELLNKVNED GTIRRMRELR QAGGSPSGLH HGNMVLYGAE PGSTTKRQRA SHSIPLQSAG LQSPMMPSHS VSSAKWGPLQ ARGTKARTPI
301: PLALPSVDPS SLINHKVYTR WPEDNNFYEA TITRYNPVTG EHGLVYDMGT QAESWESVRL CDMAPEDIRW GFDGHLSNRD VWSPSGPMLM RHMTNNGAMA
401: GSIKGRGRLS INETIKDYAP PENGTNRNFD HVDIPNTGSV VMEVKRVLFN PNMPEIEKAR KLLKDQEQSL LDAIARLDEA SDSDNEDMAM EGRMGSAGER
501: NGITT

Best Arabidopsis Sequence Match ( AT2G44440.1 )
(BLAST)

001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR

Arabidopsis Description

EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.