Factsheet for Zm00001d020946_P005

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96978	Sorghum	nucleus	86.84	83.76
TraesCS5B01G266000.1	Wheat	nucleus	67.63	65.56
TraesCS5D01G274200.1	Wheat	nucleus	67.63	65.56
HORVU5Hr1G073510.5	Barley	nucleus	67.37	65.31
TraesCS5A01G266400.1	Wheat	nucleus	67.37	65.31
Os04t0659400-01	Rice	nucleus	67.63	64.25
Zm00001d006030_P001	Maize	cytosol	81.32	61.19
Zm00001d052893_P002	Maize	nucleus	36.84	44.03
Zm00001d019922_P003	Maize	nucleus	47.11	39.6
Zm00001d050116_P003	Maize	nucleus	45.79	37.99
Zm00001d005106_P005	Maize	mitochondrion	45.53	37.53
Zm00001d032901_P001	Maize	nucleus	16.05	8.96

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	UniProt:A0A1D6I774	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom
InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832
InterPro:IPR005491	ProteinID:ONM55922.1	PFAM:PF03735	PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF1
SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI000842AE39	EnsemblPlantsGene:Zm00001d020946	EnsemblPlants:Zm00001d020946_P005
EnsemblPlants:Zm00001d020946_T005	:	:	:	:	:

Description

Protein EMSY-LIKE 4

Coordinates

chr7:+:137472539..137479934

Molecular Weight (calculated)

42540.8 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.750

Length

380 amino acids

Sequence
(BLAST)

001: MKAVGYNLYD SSGTDDDLPP AQNRGLRGRV FSGNGRASAG AFPYMRANND LESEIHRVEQ DAYTGVLRAF KVQSDAISWE KESLITELRK ELRVSDEEHR
101: ELLNKVNEDG SIRQMRELRQ AGGIPSGLHR GNRVLYDAEP GPTTKRQRAS HSIPSQSAGL QSPMMPSHSV SSAKWGPLSA RGKKAKMPIP LVLPSVDPSS
201: LINHKVYTRW PEDNNFYEAT ITKYNAVTGE HELVYDMGTQ AETWEWVRLC DVSTMAPEDI RWEFDGHLSN HDGWGPSGPM LKRHMTNNGA MAGSIRGRGR
301: LSINEPIKDY APPQNDINRN FDYIDIPNTE SVVTEVERVL ANPNMPEIEK ARKLLKDQEQ SLLDAIARLD EASDSDSGNW

Best Arabidopsis Sequence Match ( AT2G44440.1 )
(BLAST)

001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR

Arabidopsis Description

EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.