Factsheet for GSMUA_Achr4P13240_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	60.74	77.14
GSMUA_Achr4P11340_001	Banana	cytosol	46.83	62.91
GSMUA_Achr11P...	Banana	nucleus	31.9	62.15
Bra006175.1-P	Field mustard	nucleus	48.47	61.56
KRG93077	Soybean	nucleus	52.56	61.48
Bra008863.1-P	Field mustard	nucleus	49.49	61.42
CDX85675	Canola	nucleus	48.67	60.87
AT5G13020.1	Thale cress	nucleus	49.28	60.71
CDX70488	Canola	nucleus	47.44	60.42
CDX78501	Canola	nucleus	47.85	60.31
CDX97218	Canola	nucleus	50.72	60.05
Os08t0328300-02	Rice	nucleus	55.62	59.39
CDX69677	Canola	nucleus	50.1	59.32
KRH36326	Soybean	nucleus	37.63	58.04
EES14911	Sorghum	nucleus	53.99	57.52
GSMUA_Achr3P11710_001	Banana	nucleus	57.26	57.38
VIT_06s0004g01350.t01	Wine grape	nucleus	53.99	55.58
OQU89150	Sorghum	nucleus	50.72	54.63
HORVU5Hr1G053150.1	Barley	nucleus, plastid	52.76	54.55
Zm00001d050116_P003	Maize	nucleus	50.92	54.37
TraesCS5B01G170500.1	Wheat	nucleus	52.56	54.22
TraesCS5D01G177600.1	Wheat	nucleus	52.35	54.01
Zm00001d019922_P003	Maize	nucleus	49.49	53.54
TraesCS5A01G173100.1	Wheat	nucleus, plastid	51.53	53.16
Zm00001d005106_P005	Maize	mitochondrion	49.28	52.28
Os09t0279000-01	Rice	mitochondrion	50.72	48.06
GSMUA_Achr7P06400_001	Banana	cytosol	69.33	47.48
Bra023388.1-P	Field mustard	cytosol	45.6	38.32
CDX91150	Canola	nucleus	49.08	35.14
GSMUA_Achr11P...	Banana	plastid	16.77	34.75
GSMUA_Achr8P04620_001	Banana	cytosol	13.29	34.57
KXG35268	Sorghum	mitochondrion, nucleus	40.08	31.66
GSMUA_Achr8P04630_001	Banana	nucleus	10.22	23.36

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf
GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	EnsemblPlantsGene:GSMUA_Achr4G13240_001
EnsemblPlants:GSMUA_Achr4P13240_001	EnsemblPlants:GSMUA_Achr4T13240_001	InterPro:IPR005491	UniProt:M0SNI9	PFAM:PF03735	PFscan:PS51138
PANTHER:PTHR33432	PANTHER:PTHR33432:SF6	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI000294960A
SEG:seg	:	:	:	:	:

Description

ENT domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G13240_001]

Coordinates

chr4:+:9847270..9852257

Molecular Weight (calculated)

53092.9 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.829

Length

489 amino acids

Sequence
(BLAST)

001: MEYGPSDSSG TDDDLPPTHH NRGARGGHVS GNGRAIVGAI VYPRLQNDME VQIHRLEQEA YTSVLRAFKA QSDAITWEKE SLITELRKEL RVSDKEHREL
101: LSRVNADDII RRIREWRQTG GLQTGMLTNA QPDVAAPSPT VSASRKRQKT SQPIPSLSIG APSPALQSQL GAPMQPSSSA AKRAASAGTK SKKPKSGRTL
201: PGASLVKSMK YPSAGPSGRS QVANRNSSGV LVAGEPAEPA SFDPLIGRKV MTRWPEDNNF YEAVITDYNP VEGLHALVYD IHTKNETWEW VNLKEISPED
301: IRWEGGDPGI THRSGQGPQG RGVKRTTGRG GSIPGAGKGR GSLKNQKKRD FPPSQNGISK KTTGDIEILD TNTLIKEVEK LLGASHPDPL EFEKAKKMLK
401: EHELSLIDAI ARLADASDGE SEDAERQFSY GQSMDRDRGW RDRQYGGNPH GADHDDDMAV EGGEGSEGDR MVAGGVSMGY HRGGNDDDL

Best Arabidopsis Sequence Match ( AT5G13020.1 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.