Factsheet for Bra023388.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85675	Canola	nucleus	58.25	86.7
Bra008863.1-P	Field mustard	nucleus	52.23	77.16
Bra006175.1-P	Field mustard	nucleus	50.34	76.1
AT5G13020.1	Thale cress	nucleus	49.14	72.04
KRH36326	Soybean	nucleus	32.47	59.62
KRG93077	Soybean	nucleus	40.55	56.46
Bra009226.1-P	Field mustard	cytosol	29.73	55.99
GSMUA_AchrUn_...	Banana	nucleus	34.02	51.43
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	29.04	50.6
VIT_06s0004g01350.t01	Wine grape	nucleus	40.55	49.68
Bra038698.1-P	Field mustard	extracellular	30.93	46.88
GSMUA_Achr4P13240_001	Banana	nucleus	38.32	45.6
EES14911	Sorghum	nucleus	34.36	43.57
Os08t0328300-02	Rice	nucleus	34.02	43.23
OQU89150	Sorghum	nucleus	33.51	42.95
GSMUA_Achr3P11710_001	Banana	nucleus	35.91	42.83
Zm00001d019922_P003	Maize	nucleus	33.16	42.7
Zm00001d050116_P003	Maize	nucleus	33.51	42.58
HORVU5Hr1G053150.1	Barley	nucleus, plastid	34.36	42.28
Zm00001d005106_P005	Maize	mitochondrion	33.33	42.08
TraesCS5B01G170500.1	Wheat	nucleus	34.02	41.77
TraesCS5D01G177600.1	Wheat	nucleus	33.85	41.56
TraesCS5A01G173100.1	Wheat	nucleus, plastid	33.68	41.35
Bra004832.1-P	Field mustard	cytosol	28.69	40.73
GSMUA_Achr4P11340_001	Banana	cytosol	25.26	40.38
Os09t0279000-01	Rice	mitochondrion	33.85	38.18
GSMUA_Achr7P06400_001	Banana	cytosol	37.8	30.81
Bra000353.1-P	Field mustard	nucleus	26.46	29.0
KXG35268	Sorghum	mitochondrion, nucleus	28.69	26.98
Bra041089.1-P	Field mustard	cytosol	13.06	25.33

Protein Annotations

Gene3D:1.10.1240.40	Gene3D:3.40.50.10420	MapMan:7.5.7.5	InterPro:Agenet_dom_plant	EnsemblPlantsGene:Bra023388	EnsemblPlants:Bra023388.1
EnsemblPlants:Bra023388.1-P	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	InterPro:FTHF_cligase
InterPro:FTHF_cligase-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832
InterPro:IPR005491	InterPro:IPR024185	UniProt:M4E3N5	InterPro:NagB/RpiA_transferase-like	PFAM:PF01812	PFAM:PF03735
PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF6	SMART:SM00743	SMART:SM01191	SUPFAM:SSF100950
SUPFAM:SSF158639	SUPFAM:SSF63748	TIGRFAMs:TIGR02727	UniParc:UPI0002543472	SEG:seg	:

Description

AT5G13020 (E=8e-156) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA02:-:3145544..3150440

Molecular Weight (calculated)

64397.9 Da

IEP (calculated)

8.978

GRAVY (calculated)

-0.588

Length

582 amino acids

Sequence
(BLAST)

001: MSTTSKSQEE LDSIFKQKRV VRSTVRKSLK AMNPSLRTQQ DDAIQNTVLE APWFKSCRRL CAYISCKSLN EVDTSRILSK ILQHPDSNTM GAKKLYVPWV
101: EDKKSNMRML HISHMDDLIA NSMNILEPAL VDALGNERED VLQADEPIDL FILPGLAFDR CGRRLGRGGG YYDTFLKRYE DRAKAKGWSN PLMVALSYSP
201: QILEDGGIPV TPNDVMIDAL VTPSGVVPIT PPAIERVHND METQIHLIEQ EAYSSILRAF KAQSDAITWE KESLITELRK ELRVSDEEHR ELLSRVNADE
301: MIRRIREWRK GNSFQSGAPQ MVHDNAPSPA VSGSRKKQKT SQPIASLAMG APSPAMHPSM QPSSSAALRR GGPPPGPKTK KPKTFPATGI AGRPQPGAVA
401: NEPDPLVGKK VWTKWPEDNN FYEAVITDYK AAEGRHALVY DMNTLNETWE WVNLKEISPG DIRWEGEDAG VSRKGGHPGQ GRGSTKAMAR GGPAGQAIGR
501: GRGSMKIQQH KAQNGVGKKA LGDIEILHTD TLIKEVEKVF RSVNPSPAEV EKAKKVLRDH EQALVDAIAR LEEMSDGESG NI

Best Arabidopsis Sequence Match ( AT5G13020.1 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.