Factsheet for Bra038698.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
mitochondrion 1
extracellular 4
plastid 1
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50571	Canola	extracellular	93.49	89.3
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	71.88	82.63
Bra009226.1-P	Field mustard	cytosol	55.99	69.58
AT3G12140.3	Thale cress	cytosol	67.97	68.15
KRH38126	Soybean	nucleus	52.34	60.36
Bra006175.1-P	Field mustard	nucleus	45.83	45.71
KRH71929	Soybean	nucleus	50.0	45.28
Bra008863.1-P	Field mustard	nucleus	45.83	44.67
GSMUA_Achr11P...	Banana	nucleus	28.12	43.03
Os08t0328300-02	Rice	nucleus	45.83	38.43
Zm00001d019922_P003	Maize	nucleus	44.53	37.83
OQU89150	Sorghum	nucleus	44.27	37.44
HORVU5Hr1G053150.1	Barley	nucleus, plastid	45.83	37.21
TraesCS5A01G173100.1	Wheat	nucleus, plastid	45.57	36.92
TraesCS5D01G177600.1	Wheat	nucleus	45.57	36.92
TraesCS5B01G170500.1	Wheat	nucleus	45.31	36.71
Zm00001d050116_P003	Maize	nucleus	43.75	36.68
Zm00001d005106_P005	Maize	mitochondrion	43.75	36.44
EES14911	Sorghum	nucleus	43.23	36.17
Bra004832.1-P	Field mustard	cytosol	37.24	34.88
Solyc03g063280.2.1	Tomato	nucleus	40.89	34.2
Os09t0279000-01	Rice	mitochondrion	44.79	33.33
PGSC0003DMT400046911	Potato	cytoskeleton, cytosol, nucleus	13.02	31.65
Bra023388.1-P	Field mustard	cytosol	46.88	30.93
Bra000353.1-P	Field mustard	nucleus	35.16	25.42
Bra041089.1-P	Field mustard	cytosol	17.71	22.67
KXG35268	Sorghum	mitochondrion, nucleus	35.94	22.29

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	InterPro:Agenet_dom_plant	EnsemblPlantsGene:Bra038698	EnsemblPlants:Bra038698.1	EnsemblPlants:Bra038698.1-P
ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	UniProt:M4FC82	PFAM:PF03735
PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF7	SMART:SM00743	SMART:SM01191	SUPFAM:SSF158639
SUPFAM:SSF63748	UniParc:UPI0002545415	:	:	:	:

Description

AT5G06780 (E=8e-117) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA01:+:26527399..26529642

Molecular Weight (calculated)

43075.0 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.666

Length

384 amino acids

Sequence
(BLAST)

001: MGSFEACNKV LFLDLVAYLS QHLGTNAFKK DCFHLDGKSL WLNYISDMEA QIHLLEQEAY TAVLRAFKAQ SDAISWDKES LITDLRRELR VSDDEHRELL
101: SRVNKDDTIQ RIRDWRQGGG SQVPSRHATN QGFDVVPSPT FSASRKKQKP FQSYPSFGAA GNRSFNSRVV SGGISANESA EALIGRKVWT KWPEDNNFYE
201: AIITQYNAAE FIDLLYSSQG RHALVYDIHA ANETWEWVDL KEIPPEDIRW DGEESGVALN AGLGSGSIRG NRRNYQSNIG RGRGPRIHQP RREFLPTQQN
301: GGGGGDRITS SDDIELFNTD SLVKEVERVF DTAHPDPFEL DKAKKMLKEH EQALIAAIAR LADTSDGELD GDPPDSHDHP MAQG

Best Arabidopsis Sequence Match ( AT3G12140.2 )
(BLAST)

001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG

Arabidopsis Description

EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.