Factsheet for Bra004832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68247	Canola	nucleus	88.78	91.46
AT2G44440.1	Thale cress	nucleus	67.56	64.57
VIT_13s0156g00360.t01	Wine grape	nucleus	51.95	49.19
Bra006175.1-P	Field mustard	nucleus	45.37	48.31
Bra000353.1-P	Field mustard	nucleus	62.44	48.21
Solyc01g073960.2.1	Tomato	nucleus	50.0	48.01
PGSC0003DMT400016200	Potato	nucleus	50.0	47.9
KRH27522	Soybean	nucleus	50.49	47.48
Bra008863.1-P	Field mustard	nucleus	45.37	47.21
Solyc10g044960.1.1	Tomato	nucleus	48.29	45.83
Bra009226.1-P	Field mustard	cytosol	34.15	45.31
KRH13882	Soybean	nucleus	45.85	43.42
KRH43436	Soybean	cytosol	46.34	43.28
KRH36382	Soybean	nucleus	49.51	43.19
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	34.39	42.22
PGSC0003DMT400053543	Potato	nucleus	38.78	40.36
OQU89150	Sorghum	nucleus	43.66	39.43
Zm00001d019922_P003	Maize	nucleus	43.41	39.38
HORVU5Hr1G053150.1	Barley	nucleus, plastid	44.63	38.69
TraesCS5B01G170500.1	Wheat	nucleus	44.39	38.4
Solyc06g009900.1.1	Tomato	nucleus	36.59	38.36
Os08t0328300-02	Rice	nucleus	42.68	38.21
TraesCS5D01G177600.1	Wheat	nucleus	44.15	38.19
EES14911	Sorghum	nucleus	42.2	37.69
Zm00001d005106_P005	Maize	mitochondrion	41.95	37.31
Bra038698.1-P	Field mustard	extracellular	34.88	37.24
TraesCS5A01G173100.1	Wheat	nucleus, plastid	42.93	37.13
Zm00001d050116_P003	Maize	nucleus	41.22	36.9
Bra041089.1-P	Field mustard	cytosol	24.88	34.0
Os09t0279000-01	Rice	mitochondrion	42.44	33.72
Bra023388.1-P	Field mustard	cytosol	40.73	28.69
GSMUA_Achr11P...	Banana	plastid	14.39	25.0
KXG35268	Sorghum	mitochondrion, nucleus	35.61	23.59

Protein Annotations

Gene3D:1.10.1240.40	Gene3D:2.30.30.140	MapMan:35.1	EnsemblPlantsGene:Bra004832	EnsemblPlants:Bra004832.1	EnsemblPlants:Bra004832.1-P
ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	UniProt:M4CKU6	PFAM:PF03735
PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF6	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748
UniParc:UPI0002547D2E	SEG:seg	:	:	:	:

Description

AT2G44440 (E=1e-142) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA05:-:2006506..2008503

Molecular Weight (calculated)

45404.8 Da

IEP (calculated)

9.885

GRAVY (calculated)

-0.768

Length

410 amino acids

Sequence
(BLAST)

001: MLRITEAAIE FDLKLKIRVC KRTDDDLPPS HRVARGGRVA GNGRPSSLLP PSYPKMYDEV GADMEAQIHQ IEKEAYISIL RAFKAQADAI TWEKESLITE
101: LRKELRVEWR QSGGMQPTMR NAAQVVHDTL PTPSVSASVK KQKLNQPMPS QPFASHPQAD LTHQFASSTA KRGPVPIVKG KKHKPGFPGS SSGKPVSYHP
201: SDQPQRGQVM NRVPPGPTSS SEPTNGNDPE SFVGRKVRTR WPEDNTFYEA VITKYSPLEG RHALVYDIGT PNETWEWVKL SEISAGDIEW IGEDPRVGNQ
301: YGVNGQGHGL NRTTGPNSVP QRGSGLGKTS IKKDFRTSQN GTGKRKHMDI RIRQTNVLIR DVERVLGSHN PDPQEVERAK RMLEEQEQAL VGAIAKLGDI
401: SDGEHGKCLV

Best Arabidopsis Sequence Match ( AT2G44440.1 )
(BLAST)

001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR

Arabidopsis Description

EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.