Factsheet for Bra008863.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69677	Canola	nucleus	98.73	94.19
CDX97218	Canola	nucleus	97.21	92.74
Bra006175.1-P	Field mustard	nucleus	85.28	87.27
AT5G13020.1	Thale cress	nucleus	82.23	81.61
KRH36326	Soybean	nucleus	47.72	59.31
KRG93077	Soybean	nucleus	60.15	56.7
Bra009226.1-P	Field mustard	cytosol	44.42	56.63
VIT_06s0004g01350.t01	Wine grape	nucleus	64.97	53.89
Bra023388.1-P	Field mustard	cytosol	77.16	52.23
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	43.91	51.8
GSMUA_AchrUn_...	Banana	nucleus	50.25	51.43
GSMUA_Achr4P13240_001	Banana	nucleus	61.42	49.49
Os08t0328300-02	Rice	nucleus	55.08	47.38
OQU89150	Sorghum	nucleus	53.05	46.04
Bra038698.1-P	Field mustard	extracellular	44.67	45.83
EES14911	Sorghum	nucleus	53.3	45.75
HORVU5Hr1G053150.1	Barley	nucleus, plastid	54.57	45.45
Bra004832.1-P	Field mustard	cytosol	47.21	45.37
TraesCS5D01G177600.1	Wheat	nucleus	54.06	44.94
Zm00001d019922_P003	Maize	nucleus	51.27	44.69
Zm00001d050116_P003	Maize	nucleus	51.78	44.54
TraesCS5A01G173100.1	Wheat	nucleus, plastid	53.55	44.51
TraesCS5B01G170500.1	Wheat	nucleus	53.55	44.51
Zm00001d005106_P005	Maize	mitochondrion	51.02	43.6
GSMUA_Achr3P11710_001	Banana	nucleus	52.54	42.42
Os09t0279000-01	Rice	mitochondrion	52.54	40.12
GSMUA_Achr4P11340_001	Banana	cytosol	36.8	39.84
GSMUA_Achr7P06400_001	Banana	cytosol	61.42	33.89
Bra000353.1-P	Field mustard	nucleus	43.91	32.58
KXG35268	Sorghum	mitochondrion, nucleus	43.65	27.79
Bra041089.1-P	Field mustard	cytosol	20.3	26.67

Protein Annotations

Gene3D:1.10.1240.40	MapMan:35.1	InterPro:Agenet_dom_plant	EnsemblPlantsGene:Bra008863	EnsemblPlants:Bra008863.1	EnsemblPlants:Bra008863.1-P
ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom	InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0050832	InterPro:IPR005491	UniProt:M4CXB6	PFAM:PF03735
PFscan:PS51138	PANTHER:PTHR33432	PANTHER:PTHR33432:SF6	SMART:SM00743	SMART:SM01191	SUPFAM:SSF158639
SUPFAM:SSF63748	UniParc:UPI0002543B57	SEG:seg	:	:	:

Description

AT5G13020 (E=2e-187) | emsy N terminus domain-containing protein / ENT domain-containing protein

Coordinates

chrA10:+:14179709..14181733

Molecular Weight (calculated)

43162.6 Da

IEP (calculated)

8.755

GRAVY (calculated)

-0.877

Length

394 amino acids

Sequence
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ SRYQRSGRPA GNGRPSVLNS APLSRMHNDM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKG NSLQPGGPQM VHDSAPSPAV SGSRKKQKTS QPFASLAPAL HPSMQPSSSA LRRGGPPPGP KTKKPKTSMQ FPATSIAGRP
201: QSGALGHEPG ETGSLDPLIG KKVWTKWPED NNFYEAVITD YNAVEGRHAL VYDMNTGNET WEWVNLKEIS PGDIRWEGED AGVSRKGGHP GQGRGSAKAM
301: PRGGPTGNTV GRGRGSMKTQ QHKAQNGIGN KALGDIELLH TDTLIKEVEK VFGSVNPNPA EVEKAKRVLR DHEQALVDAI ARLEEMSDGE SGNI

Best Arabidopsis Sequence Match ( AT5G13020.1 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.