Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70488 | Canola | nucleus | 82.87 | 85.68 |
| CDX78501 | Canola | nucleus | 82.87 | 84.79 |
| Bra006175.1-P | Field mustard | nucleus | 80.1 | 82.6 |
| Bra008863.1-P | Field mustard | nucleus | 81.61 | 82.23 |
| CDX85675 | Canola | nucleus | 79.09 | 80.31 |
| CDX97218 | Canola | nucleus | 82.37 | 79.18 |
| CDX69677 | Canola | nucleus | 81.36 | 78.21 |
| KRH36326 | Soybean | nucleus | 47.36 | 59.31 |
| KRG93077 | Soybean | nucleus | 58.19 | 55.26 |
| VIT_06s0004g01350.t01 | Wine grape | nucleus | 64.23 | 53.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.63 | 52.21 |
| AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 40.3 | 50.0 |
| GSMUA_Achr4P13240_001 | Banana | nucleus | 60.71 | 49.28 |
| Bra023388.1-P | Field mustard | cytosol | 72.04 | 49.14 |
| Os08t0328300-02 | Rice | nucleus | 56.17 | 48.69 |
| AT2G44440.1 | Thale cress | nucleus | 51.39 | 47.55 |
| EES14911 | Sorghum | nucleus | 54.91 | 47.49 |
| Zm00001d019922_P003 | Maize | nucleus | 52.14 | 45.8 |
| OQU89150 | Sorghum | nucleus | 51.89 | 45.37 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 53.9 | 45.24 |
| CDX91150 | Canola | nucleus | 77.83 | 45.24 |
| Zm00001d050116_P003 | Maize | nucleus | 52.14 | 45.2 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 53.4 | 44.73 |
| AT3G12140.3 | Thale cress | cytosol | 43.07 | 44.65 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 53.15 | 44.51 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 52.64 | 44.09 |
| GSMUA_Achr3P11710_001 | Banana | nucleus | 53.4 | 43.44 |
| Zm00001d005106_P005 | Maize | mitochondrion | 49.87 | 42.95 |
| GSMUA_Achr4P11340_001 | Banana | cytosol | 37.53 | 40.93 |
| Os09t0279000-01 | Rice | mitochondrion | 53.15 | 40.89 |
| GSMUA_Achr7P06400_001 | Banana | cytosol | 60.96 | 33.89 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 42.07 | 26.98 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | EntrezGene:831142 | UniProt:A0A178UIH0 | ProteinID:AED91842.1 | ArrayExpress:AT5G13020 |
| EnsemblPlantsGene:AT5G13020 | RefSeq:AT5G13020 | TAIR:AT5G13020 | RefSeq:AT5G13020-TAIR-G | EnsemblPlants:AT5G13020.1 | TAIR:AT5G13020.1 |
| InterPro:Agenet_dom_plant | ProteinID:CAB88266.1 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf |
| UniProt:F4K2F0 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:IPR005491 |
| RefSeq:NP_196806.2 | ProteinID:OAO92964.1 | PFAM:PF03735 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI0000196CF2 | SEG:seg | : | : | : |
Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
Coordinates
chr5:-:4129154..4132938
Molecular Weight (calculated)
43655.2 Da
IEP (calculated)
9.090
GRAVY (calculated)
-0.873
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.