Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra016529.1-P | |
| Bra024072.1-P | |
| Bra024408.1-P | |
| Bra031849.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06780.1 | Bra016529.1-P | AT1G19010.1 | 21798944 |
| AT5G06780.1 | Bra024072.1-P | AT4G30490.1 | 21798944 |
| AT5G06780.1 | Bra024408.1-P | AT5G65683.1 | 21798944 |
| AT5G06780.1 | Bra031849.1-P | AT5G65683.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 77.99 | 85.46 |
| AT5G06780.1 | Thale cress | cytoskeleton, cytosol, nucleus | 72.49 | 70.0 |
| Bra001437.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 68.61 | 63.47 |
| KRH38126 | Soybean | nucleus | 64.08 | 59.46 |
| Bra038698.1-P | Field mustard | extracellular | 69.58 | 55.99 |
| Bra006175.1-P | Field mustard | nucleus | 55.66 | 44.68 |
| Bra008863.1-P | Field mustard | nucleus | 56.63 | 44.42 |
| GSMUA_Achr11P... | Banana | nucleus | 35.92 | 44.22 |
| KRH71929 | Soybean | nucleus | 60.52 | 44.1 |
| Zm00001d019922_P003 | Maize | nucleus | 53.72 | 36.73 |
| Os08t0328300-02 | Rice | nucleus | 54.37 | 36.68 |
| OQU89150 | Sorghum | nucleus | 53.07 | 36.12 |
| EES14911 | Sorghum | nucleus | 53.4 | 35.95 |
| Zm00001d050116_P003 | Maize | nucleus | 52.75 | 35.59 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 54.37 | 35.52 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 54.05 | 35.23 |
| Solyc03g063280.2.1 | Tomato | nucleus | 52.1 | 35.08 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 53.72 | 35.02 |
| Zm00001d005106_P005 | Maize | mitochondrion | 52.1 | 34.92 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 53.4 | 34.81 |
| Bra004832.1-P | Field mustard | cytosol | 45.31 | 34.15 |
| Os09t0279000-01 | Rice | mitochondrion | 54.05 | 32.36 |
| Bra023388.1-P | Field mustard | cytosol | 55.99 | 29.73 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 14.56 | 28.48 |
| Bra000353.1-P | Field mustard | nucleus | 41.75 | 24.29 |
| Bra041089.1-P | Field mustard | cytosol | 22.33 | 23.0 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 44.01 | 21.97 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | InterPro:Agenet_dom_plant | EnsemblPlantsGene:Bra009226 | EnsemblPlants:Bra009226.1 | EnsemblPlants:Bra009226.1-P |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0000003 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0010228 | GO:GO:0050832 | InterPro:IPR005491 | UniProt:M4CYC9 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF7 | SMART:SM00743 | SMART:SM01191 | SUPFAM:SSF158639 |
| SUPFAM:SSF63748 | UniParc:UPI00025451CF | SEG:seg | : | : | : |
Description
AT5G06780 (E=1e-125) | emsy N terminus domain-containing protein / ENT domain-containing protein
Coordinates
chrA10:-:15725492..15727012
Molecular Weight (calculated)
34942.9 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.660
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEIHILEQ EAYCAVLRAF KAQSDAISWE KESMITELRK ELRVSDDEHR ELLTSVHNDD IIKRIREWRQ GGGNQVVRHV NNQSLDVLPS PAYSASRKKQ
101: KTFQSYPSMG STRSRSFNNH LVSGAVSANE PAEALIGRKV WTKWPEDNSF YEAVITQYNA VEGLHALVYD LNTANETWEW VDLKEIPPQD IRWGGEENGA
201: ALNAGHGSRR TLSNGGLGRV PLTQPRRDHL VAQNGGGRKL FDEIELFNTD SLVKEVERVF DSNLPDPHEL DKAKKLLKEH EQALVSAIAR LADASDFESG
301: KKHESLYMT
101: KTFQSYPSMG STRSRSFNNH LVSGAVSANE PAEALIGRKV WTKWPEDNSF YEAVITQYNA VEGLHALVYD LNTANETWEW VDLKEIPPQD IRWGGEENGA
201: ALNAGHGSRR TLSNGGLGRV PLTQPRRDHL VAQNGGGRKL FDEIELFNTD SLVKEVERVF DSNLPDPHEL DKAKKLLKEH EQALVSAIAR LADASDFESG
301: KKHESLYMT
001: MEAQIHILEQ EAYSAVLRAF QAQADEFSWD KATVMTNLRK ELRISDDENR QLLNNVHNDD LIKRIRDSRP RGGNQVVRHQ SLDVHPSPTF SASRKKQKTF
101: QSYPSIGSTR SKSFNNRVVS ANEPAEALIG RKVWTKWPED NSFYEAVVTQ YNANEGRHAL VYDINTVNET WEWVDLNEIP TKDIRWDGEE DGVTLNVGHG
201: GGTTRGNRRT LSHGGRGRGP RTQPRREHLA TENGGGRKFF GEIELFNTDS LVKEVERVFD SNLPDPHELD KAKKLLKEHE QALIAAIARL TDASDYESDG
301: EEPYSHELPM LLG
101: QSYPSIGSTR SKSFNNRVVS ANEPAEALIG RKVWTKWPED NSFYEAVVTQ YNANEGRHAL VYDINTVNET WEWVDLNEIP TKDIRWDGEE DGVTLNVGHG
201: GGTTRGNRRT LSHGGRGRGP RTQPRREHLA TENGGGRKFF GEIELFNTDS LVKEVERVFD SNLPDPHELD KAKKLLKEHE QALIAAIARL TDASDYESDG
301: EEPYSHELPM LLG
Arabidopsis Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Source:TAIR;Acc:AT5G06780]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.