Factsheet for PGSC0003DMT400053543

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009900.1.1	Tomato	nucleus	85.79	86.44
PGSC0003DMT400016200	Potato	nucleus	64.47	59.35
CDY17848	Canola	cytoskeleton, cytosol, nucleus	17.77	56.91
VIT_13s0156g00360.t01	Wine grape	nucleus	61.42	55.89
KRH27522	Soybean	nucleus	59.9	54.13
KRH36382	Soybean	nucleus	59.64	50.0
KRH13882	Soybean	nucleus	51.52	46.88
KRH43436	Soybean	cytosol	51.27	46.01
AT2G44440.1	Thale cress	nucleus	45.18	41.49
Os08t0328300-02	Rice	nucleus	47.97	41.27
EES14911	Sorghum	nucleus	46.95	40.3
CDY68247	Canola	nucleus	40.61	40.2
HORVU5Hr1G053150.1	Barley	nucleus, plastid	47.72	39.75
TraesCS5D01G177600.1	Wheat	nucleus	47.72	39.66
TraesCS5B01G170500.1	Wheat	nucleus	47.46	39.45
OQU89150	Sorghum	nucleus	45.43	39.43
Zm00001d019922_P003	Maize	nucleus	44.92	39.16
TraesCS5A01G173100.1	Wheat	nucleus, plastid	46.95	39.03
Bra004832.1-P	Field mustard	cytosol	40.36	38.78
Zm00001d050116_P003	Maize	nucleus	44.92	38.65
Zm00001d005106_P005	Maize	mitochondrion	44.92	38.39
CDY17849	Canola	plastid	27.92	37.67
Os09t0279000-01	Rice	mitochondrion	44.67	34.11
CDX95603	Canola	nucleus	43.91	30.35
CDX83427	Canola	nucleus	38.58	28.63
Bra000353.1-P	Field mustard	nucleus	38.07	28.25
PGSC0003DMT400046911	Potato	cytoskeleton, cytosol, nucleus	10.41	25.95
KXG35268	Sorghum	mitochondrion, nucleus	36.29	23.1
Bra041089.1-P	Field mustard	cytosol	16.5	21.67
GSMUA_Achr11P...	Banana	plastid	12.69	21.19
CDY45580	Canola	mitochondrion	17.26	20.36

Protein Annotations

Gene3D:1.10.1240.40	EntrezGene:102579711	MapMan:35.1	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom
InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832
InterPro:IPR005491	UniProt:M1BV34	PFAM:PF03735	EnsemblPlantsGene:PGSC0003DMG400020770	PGSC:PGSC0003DMG400020770	EnsemblPlants:PGSC0003DMT400053543
PFscan:PS51138	PANTHER:PTHR33432	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF63748	UniParc:UPI000296B3C2
RefSeq:XP_006343471.2	:	:	:	:	:

Description

Emsy N terminus domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020770]

Coordinates

chr6:+:8783553..8787559

Molecular Weight (calculated)

43655.7 Da

IEP (calculated)

4.856

GRAVY (calculated)

-0.757

Length

394 amino acids

Sequence
(BLAST)

001: MAYENTGTDE DLPLSDRSMI PRGGGFGTGN DRAAMMYDET DMEVEIQQLE QEAYSSVLRA FKAQADAITW EKESLISELR KELRLSSEHH REFLGRVNED
101: DVIRRIREWR ISGMRGTGQV VHDQIPSSSV SASRRNQIIA PSLPSHSFYG PSPTFRPPAA TAENQPSTST ANRDPKDQTM PGVSSTEMQY PSLGPSGRGQ
201: SSNQVSEPDE PVSFDPLIGR KVRTRWPDDN IFYEAVIADC KAAEGKHVLV YDRGSANETS EWVNLKEISP EDIQWEGEDP GISHHGNNSE SGRGRDSDPV
301: AVRGLGLTMR QSKTDFPSSH YGIGKKGDDD IVLLRTDMLI NEVEKRIFGA SHPGPLEVEK AKEVLKDHEQ ALVAAISRLD KMISDGDSSM NRAK

Best Arabidopsis Sequence Match ( AT5G13020.1 )
(BLAST)

001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI

Arabidopsis Description

EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.