Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43436 | Soybean | cytosol | 83.6 | 82.46 |
| KRH27522 | Soybean | nucleus | 75.75 | 75.23 |
| KRH36382 | Soybean | nucleus | 76.44 | 70.43 |
| VIT_13s0156g00360.t01 | Wine grape | nucleus | 69.98 | 69.98 |
| Solyc01g073960.2.1 | Tomato | nucleus | 66.74 | 67.68 |
| PGSC0003DMT400016200 | Potato | nucleus | 66.74 | 67.52 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 17.78 | 62.6 |
| Solyc10g044960.1.1 | Tomato | nucleus | 61.43 | 61.57 |
| KRH38126 | Soybean | nucleus | 41.57 | 54.05 |
| PGSC0003DMT400053543 | Potato | nucleus | 46.88 | 51.52 |
| Solyc06g009900.1.1 | Tomato | nucleus | 45.73 | 50.64 |
| KRH36326 | Soybean | nucleus | 36.49 | 49.84 |
| KRG93077 | Soybean | nucleus | 48.04 | 49.76 |
| AT2G44440.1 | Thale cress | nucleus | 49.19 | 49.65 |
| Os08t0328300-02 | Rice | nucleus | 52.42 | 49.56 |
| CDY68247 | Canola | nucleus | 44.8 | 48.74 |
| EES14911 | Sorghum | nucleus | 49.42 | 46.62 |
| OQU89150 | Sorghum | nucleus | 48.5 | 46.26 |
| Zm00001d019922_P003 | Maize | nucleus | 48.04 | 46.02 |
| Bra004832.1-P | Field mustard | cytosol | 43.42 | 45.85 |
| Zm00001d050116_P003 | Maize | nucleus | 48.27 | 45.63 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 49.42 | 45.24 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 48.96 | 44.73 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 48.73 | 44.51 |
| CDY17849 | Canola | plastid | 29.79 | 44.18 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 47.58 | 43.46 |
| Zm00001d005106_P005 | Maize | mitochondrion | 46.19 | 43.38 |
| Os09t0279000-01 | Rice | mitochondrion | 49.88 | 41.86 |
| KRH71929 | Soybean | nucleus | 40.18 | 41.04 |
| CDX95603 | Canola | nucleus | 45.27 | 34.39 |
| Bra000353.1-P | Field mustard | nucleus | 42.03 | 34.27 |
| CDX83427 | Canola | nucleus | 40.88 | 33.33 |
| GSMUA_Achr11P... | Banana | plastid | 15.7 | 28.81 |
| KRG94907 | Soybean | cytosol | 19.17 | 26.1 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 36.72 | 25.69 |
| Bra041089.1-P | Field mustard | cytosol | 17.32 | 25.0 |
| CDY45580 | Canola | mitochondrion | 18.01 | 23.35 |
Protein Annotations
| Gene3D:1.10.1240.40 | EntrezGene:100780512 | Gene3D:2.30.30.140 | MapMan:35.1 | UniProt:A0A0R0G6T1 | EMBL:ACUP02009795 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | EnsemblPlantsGene:GLYMA_15G269700 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | InterPro:IPR005491 | EnsemblPlants:KRH13882 |
| ProteinID:KRH13882 | ProteinID:KRH13882.1 | PFAM:PF03735 | PFscan:PS51138 | PANTHER:PTHR33432 | SMART:SM01191 |
| SUPFAM:SSF158639 | SUPFAM:SSF63748 | UniParc:UPI00023D6956 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr15:-:50675761..50686169
Molecular Weight (calculated)
47165.1 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.647
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHEPYDSSG TDDDFPPTHQ NRIPRGAHLA GNGSAVGSIP YARMYGEIDM ETQIHQLEKE AYSSVLRAFK AQADVITWEK ESLTTELRKE LRLSNEELRE
101: LLGHVNADDV IQNIREWRQA GGNQLGVLSF GQAIHDSIPS PPISASRKKQ KITPSALSQS FGGPSPFHPQ SVDAPVQSSL VEKRGPVSGS KGKKHKPGHA
201: LPGVSSIKQY PSSGLGGRNQ VPNRVTSGTV MGELAEGASL DSLVGRRVRT RWPDDNNFYE AVISDYNRSE GLHALFYDLG TANESWEWVN LSEMSPADIQ
301: WVGEDPGVNR RQGFGGSGNG MRRSVGRGSV PGVGKGRGTA KGQSRKDFLP SQNGIGMKTP DDIQILHTDT LVKEVERVFN AKHPDALEIE QVKKVLKDHE
401: QALIDAIARL ADLSDGESDE GGFHFSHATA MAH
101: LLGHVNADDV IQNIREWRQA GGNQLGVLSF GQAIHDSIPS PPISASRKKQ KITPSALSQS FGGPSPFHPQ SVDAPVQSSL VEKRGPVSGS KGKKHKPGHA
201: LPGVSSIKQY PSSGLGGRNQ VPNRVTSGTV MGELAEGASL DSLVGRRVRT RWPDDNNFYE AVISDYNRSE GLHALFYDLG TANESWEWVN LSEMSPADIQ
301: WVGEDPGVNR RQGFGGSGNG MRRSVGRGSV PGVGKGRGTA KGQSRKDFLP SQNGIGMKTP DDIQILHTDT LVKEVERVFN AKHPDALEIE QVKKVLKDHE
401: QALIDAIARL ADLSDGESDE GGFHFSHATA MAH
001: MDCKSSDSSG TDDDLPPSHR VPRGGGGGRG GRVAGNGRPL NLPPSYPKMY DDLAADMEAQ IHQIEKEAYI SVLRAFKAQG DAISWEKESV ITELRKELSL
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
101: SNEEHRELLG RVNSDDTIRR IREWRQSGGM QPSMRNAAQV VHDTLPSPSV SASMKTHKPN QPIPSQPFAS SSPSFHPQAD PTHPFASSTA KRGPVPIVKG
201: KKHKPVFPGS SSTKHAPYHP SDQPPRGQVM NRLPSVPASS SEPTNGIDPE SFLGRRVRTK WPEDNTFYDA IITQYNPVEG RHALVYDIAT PSETWEWVRL
301: SEISPGDIEW IGEDPGLGNR YNGQGHGLNR TTGPNCVPQR GSGLEKNTIR KGFRTSQNGT GKKKHLDIRI RQTDVLIREV ERVLRSHNPD PYEVERAKRV
401: LEEHEHALVG AIAKLGDISD GENEGAFRR
Arabidopsis Description
EML4Protein EMSY-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q08A72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.