Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g073960.2.1 | Tomato | nucleus | 98.83 | 99.06 |
| VIT_13s0156g00360.t01 | Wine grape | nucleus | 75.23 | 74.36 |
| KRH27522 | Soybean | nucleus | 72.9 | 71.56 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 20.56 | 71.54 |
| KRH13882 | Soybean | nucleus | 67.52 | 66.74 |
| KRH36382 | Soybean | nucleus | 72.66 | 66.17 |
| KRH43436 | Soybean | cytosol | 67.06 | 65.38 |
| PGSC0003DMT400053543 | Potato | nucleus | 59.35 | 64.47 |
| AT2G44440.1 | Thale cress | nucleus | 56.54 | 56.41 |
| Os08t0328300-02 | Rice | nucleus | 56.54 | 52.84 |
| CDY68247 | Canola | nucleus | 48.83 | 52.51 |
| OQU89150 | Sorghum | nucleus | 53.04 | 50.0 |
| Bra004832.1-P | Field mustard | cytosol | 47.9 | 50.0 |
| Zm00001d019922_P003 | Maize | nucleus | 52.34 | 49.56 |
| EES14911 | Sorghum | nucleus | 53.04 | 49.46 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 54.67 | 49.37 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 54.44 | 49.26 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 54.44 | 49.16 |
| CDY17849 | Canola | plastid | 32.94 | 48.29 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 52.57 | 47.47 |
| Zm00001d005106_P005 | Maize | mitochondrion | 50.93 | 47.29 |
| Zm00001d050116_P003 | Maize | nucleus | 49.77 | 46.51 |
| Os09t0279000-01 | Rice | mitochondrion | 52.8 | 43.8 |
| CDX95603 | Canola | nucleus | 50.0 | 37.54 |
| CDX83427 | Canola | nucleus | 44.63 | 35.97 |
| Bra000353.1-P | Field mustard | nucleus | 44.63 | 35.97 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 12.38 | 33.54 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 42.29 | 29.24 |
| GSMUA_Achr11P... | Banana | plastid | 14.95 | 27.12 |
| Bra041089.1-P | Field mustard | cytosol | 18.46 | 26.33 |
| CDY45580 | Canola | mitochondrion | 19.63 | 25.15 |
Protein Annotations
| Gene3D:1.10.1240.40 | EntrezGene:102600733 | MapMan:35.1 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom |
| InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 |
| InterPro:IPR005491 | UniProt:M1A797 | PFAM:PF03735 | EnsemblPlantsGene:PGSC0003DMG402006332 | PGSC:PGSC0003DMG402006332 | EnsemblPlants:PGSC0003DMT400016200 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF6 | SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 |
| UniParc:UPI000294D0C4 | RefSeq:XP_006359168.1 | SEG:seg | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402006332]
Coordinates
chr1:+:66615706..66622212
Molecular Weight (calculated)
46911.9 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.868
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYEPYDSSG TDDDLPPSHQ NRIPRGGGRM NGNGRAAVMA SVPYQRMYGE TDMEAQIHQL EQEAYSSVLR AFKAQADAIS WEKESLITEL RKELRLSNEE
101: HRELLGRVNA DDVIRRIREW RQSGAHQPGM LGTGQAIHDP LPSPSVSASR KKQKIAPPLP SQSFAGPSPT FHPPALAAAN QPSSSAAKRG PMMGPKGKKS
201: KSGQMMPGAS SMKMQYPPSG PFGRGQLDNR VSESAKAASV DSLIGRKVRT RWPDDNNFYE AVITDYNKAE GRHALVYDMS TANETWEWVN LSEISPEDIQ
301: WDGEDPGISR HGNYGGSGRG VNRPVGRDSG PGAGRGRGLA KPQSRKGFPP SQNGGKKGSD DIQLLHTDTL IKEVERVFGA SHPDPLEVEK AKKVLKEHEQ
401: ALLEAISRLG EISDGESDEH FMQAMNRE
101: HRELLGRVNA DDVIRRIREW RQSGAHQPGM LGTGQAIHDP LPSPSVSASR KKQKIAPPLP SQSFAGPSPT FHPPALAAAN QPSSSAAKRG PMMGPKGKKS
201: KSGQMMPGAS SMKMQYPPSG PFGRGQLDNR VSESAKAASV DSLIGRKVRT RWPDDNNFYE AVITDYNKAE GRHALVYDMS TANETWEWVN LSEISPEDIQ
301: WDGEDPGISR HGNYGGSGRG VNRPVGRDSG PGAGRGRGLA KPQSRKGFPP SQNGGKKGSD DIQLLHTDTL IKEVERVFGA SHPDPLEVEK AKKVLKEHEQ
401: ALLEAISRLG EISDGESDEH FMQAMNRE
001: MDYRPSDSSG TDDDLPPSHQ GRYQRNARPT GNGRPSVLNS APLSRVHNEM ETQIHLIEQE AYSSILRAFK AQSDAITWEK ESLITELRKE LRVSDEEHRE
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
101: LLSRVNADEM IRRIREWRKA NSLQSSVPQL VHDAPSPAVS GSRKKQKTSQ SIASLAMGPP SPSLHPSMQP SSSALRRGGP PPGPKTKKPK TSMQYPSTGI
201: AGRPQAGALT NEPGESGSYD PLVGRKVWTK WPDDNQYYEA VITDYNPVEG RHALVYDINS ANETWEWVNL KEISPGDIRW EGEDPGISRK GGHPGQGRGT
301: KTMARGGPAS NAGGRGRGSM RMQQPKTQNG IGKKALGEIE ILHTETLLKE VEKVFGSVNP NPAEVEKAKR VLRDHELALM DAIAKLEEIS DGESGNI
Arabidopsis Description
EML3EML3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.