Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038698.1-P | Field mustard | extracellular | 89.3 | 93.49 |
| CDX73835 | Canola | nucleus | 68.41 | 85.4 |
| CDY42126 | Canola | cytosol | 46.77 | 71.76 |
| AT3G12140.3 | Thale cress | cytosol | 65.67 | 68.93 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 53.23 | 68.81 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 45.77 | 65.25 |
| KRH38126 | Soybean | nucleus | 50.25 | 60.66 |
| CDX70488 | Canola | nucleus | 43.53 | 45.57 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 13.93 | 45.53 |
| CDX78501 | Canola | nucleus | 43.53 | 45.1 |
| CDX85675 | Canola | nucleus | 43.53 | 44.76 |
| KRH71929 | Soybean | nucleus | 47.01 | 44.58 |
| GSMUA_Achr11P... | Banana | nucleus | 26.87 | 43.03 |
| CDX69677 | Canola | nucleus | 44.03 | 42.86 |
| CDX97218 | Canola | nucleus | 43.78 | 42.62 |
| CDY00757 | Canola | cytosol | 68.91 | 39.35 |
| Os08t0328300-02 | Rice | nucleus | 43.53 | 38.21 |
| OQU89150 | Sorghum | nucleus | 42.54 | 37.67 |
| Zm00001d019922_P003 | Maize | nucleus | 42.29 | 37.61 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 43.53 | 37.0 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 43.53 | 36.92 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 43.53 | 36.92 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 43.28 | 36.71 |
| Zm00001d050116_P003 | Maize | nucleus | 41.79 | 36.68 |
| CDY68247 | Canola | nucleus | 36.07 | 36.43 |
| EES14911 | Sorghum | nucleus | 41.54 | 36.38 |
| Zm00001d005106_P005 | Maize | mitochondrion | 41.54 | 36.23 |
| CDY17849 | Canola | plastid | 25.87 | 35.62 |
| Solyc03g063280.2.1 | Tomato | nucleus | 40.3 | 35.29 |
| Os09t0279000-01 | Rice | mitochondrion | 42.79 | 33.33 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 12.19 | 31.01 |
| CDX95603 | Canola | nucleus | 38.56 | 27.19 |
| CDX91150 | Canola | nucleus | 45.27 | 26.65 |
| CDX83427 | Canola | nucleus | 33.33 | 25.24 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 34.33 | 22.29 |
| CDY45580 | Canola | mitochondrion | 17.41 | 20.96 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | UniProt:A0A078IKQ4 | InterPro:Agenet_dom_plant | EnsemblPlants:CDY50571 | ProteinID:CDY50571 |
| ProteinID:CDY50571.1 | ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00097003001 | InterPro:IPR005491 |
| PFAM:PF03735 | PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF7 | SMART:SM00743 | SMART:SM01191 |
| SUPFAM:SSF158639 | SUPFAM:SSF63748 | UniParc:UPI0004EDE091 | : | : | : |
Description
BnaA01g30850DBnaA01g30850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKQ4]
Coordinates
chrLK032922:+:97935..100747
Molecular Weight (calculated)
45014.4 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.671
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFEACNKV LFLDLVAYLS QHLGTNAFKK DCFHLDGKSL WLNYISDMEA QIHLLEQEAY TAVLRAFKAQ SDAISWDKES LITDLRRELR VSDDEHRELL
101: SRVNKDDTIQ RIRDWRQGGG SQVPSRHATN QGFDVVPSPT FSASRKKQKP FQSYPSFGAA GNRSFNSRVV SGGISANESA EALIGRKVWT KWPEDNNFYE
201: AIITQYNAAE GRHALVYDIH AANETWEWVD LKEIPPEDIR WDGEESGVAL NAGLGSGSIR GNRRNYQSNI GRGRGPRIHQ PRREFLPTQQ NGGGGGDRIT
301: SSDDIELFNT DSLVKEVERV FDIAHPDPFE LDKAKKMLKE HEQALIAAIA RLADTSDGEL GHYKHKPTIS GKNVDKHFAQ SVASLLTYGD PPDSHDHPMA
401: QG
101: SRVNKDDTIQ RIRDWRQGGG SQVPSRHATN QGFDVVPSPT FSASRKKQKP FQSYPSFGAA GNRSFNSRVV SGGISANESA EALIGRKVWT KWPEDNNFYE
201: AIITQYNAAE GRHALVYDIH AANETWEWVD LKEIPPEDIR WDGEESGVAL NAGLGSGSIR GNRRNYQSNI GRGRGPRIHQ PRREFLPTQQ NGGGGGDRIT
301: SSDDIELFNT DSLVKEVERV FDIAHPDPFE LDKAKKMLKE HEQALIAAIA RLADTSDGEL GHYKHKPTIS GKNVDKHFAQ SVASLLTYGD PPDSHDHPMA
401: QG
001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
Arabidopsis Description
EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.