Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73835 | Canola | nucleus | 66.41 | 54.04 |
| CDY50571 | Canola | extracellular | 71.76 | 46.77 |
| AT3G12140.3 | Thale cress | cytosol | 64.5 | 44.13 |
| CDX98955 | Canola | cytoskeleton, cytosol, nucleus | 52.29 | 44.05 |
| CDX70068 | Canola | cytoskeleton, cytosol, nucleus | 43.13 | 40.07 |
| KRH38126 | Soybean | nucleus | 50.76 | 39.94 |
| CDY17848 | Canola | cytoskeleton, cytosol, nucleus | 16.03 | 34.15 |
| GSMUA_Achr11P... | Banana | nucleus | 29.77 | 31.08 |
| CDX70488 | Canola | nucleus | 42.75 | 29.17 |
| CDX78501 | Canola | nucleus | 43.13 | 29.12 |
| CDX69677 | Canola | nucleus | 45.42 | 28.81 |
| CDX85675 | Canola | nucleus | 42.75 | 28.64 |
| CDX97218 | Canola | nucleus | 45.04 | 28.57 |
| KRH71929 | Soybean | nucleus | 46.18 | 28.54 |
| Os08t0328300-02 | Rice | nucleus | 43.13 | 24.67 |
| CDY00757 | Canola | cytosol | 65.27 | 24.29 |
| OQU89150 | Sorghum | nucleus | 40.84 | 23.57 |
| Zm00001d019922_P003 | Maize | nucleus | 40.46 | 23.45 |
| HORVU5Hr1G053150.1 | Barley | nucleus, plastid | 41.6 | 23.04 |
| TraesCS5D01G177600.1 | Wheat | nucleus | 41.22 | 22.78 |
| TraesCS5A01G173100.1 | Wheat | nucleus, plastid | 41.22 | 22.78 |
| CDY68247 | Canola | nucleus | 34.35 | 22.61 |
| TraesCS5B01G170500.1 | Wheat | nucleus | 40.84 | 22.57 |
| Zm00001d005106_P005 | Maize | mitochondrion | 39.31 | 22.34 |
| Zm00001d050116_P003 | Maize | nucleus | 38.55 | 22.05 |
| EES14911 | Sorghum | nucleus | 38.17 | 21.79 |
| Os09t0279000-01 | Rice | mitochondrion | 41.98 | 21.32 |
| CDY17849 | Canola | plastid | 23.66 | 21.23 |
| Solyc03g063280.2.1 | Tomato | nucleus | 36.64 | 20.91 |
| CDX95603 | Canola | nucleus | 40.08 | 18.42 |
| CDX91150 | Canola | nucleus | 44.27 | 16.98 |
| CDX83427 | Canola | nucleus | 32.82 | 16.2 |
| CDY45580 | Canola | mitochondrion | 19.08 | 14.97 |
| KXG35268 | Sorghum | mitochondrion, nucleus | 33.59 | 14.22 |
| PGSC0003DMT400046911 | Potato | cytoskeleton, cytosol, nucleus | 7.63 | 12.66 |
Protein Annotations
| Gene3D:1.10.1240.40 | MapMan:35.1 | UniProt:A0A078HWL4 | EnsemblPlants:CDY42126 | ProteinID:CDY42126 | ProteinID:CDY42126.1 |
| ncoils:Coil | InterPro:EMSY-LIKE_plant | InterPro:ENT_dom | InterPro:ENT_dom-like_sf | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00074304001 | InterPro:IPR005491 | PFAM:PF03735 |
| PFscan:PS51138 | PANTHER:PTHR33432 | PANTHER:PTHR33432:SF7 | SMART:SM01191 | SUPFAM:SSF158639 | SUPFAM:SSF63748 |
| UniParc:UPI0004EDDA65 | : | : | : | : | : |
Description
BnaC05g40930DBnaC05g40930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWL4]
Coordinates
chrLK032516:-:37207..38480
Molecular Weight (calculated)
29396.3 Da
IEP (calculated)
6.411
GRAVY (calculated)
-0.619
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQIHLLEQ EAYIASDAIS WDKEGLITEL RKELRVSDDE HRELLSRVNK DDTIGRIRDW RQGGGSQVPS RHATNQGFDV VPSPTLSASR KKQKTFQSVI
101: VGDIRAVSSN SRVVPRGVSA NESAEALIGR KVWTKWSEDN NFYEAIITQY NAVEISPEDI SWDGEENGAA LNVGVGSGST RGNRRNQSHF GRGRGPRIHQ
201: PRNEFVRLPT QQNGGDVVDR RTYFADIELF NTDSLVKEVS FLFYLLLHIV GDGLHPSTRP IE
101: VGDIRAVSSN SRVVPRGVSA NESAEALIGR KVWTKWSEDN NFYEAIITQY NAVEISPEDI SWDGEENGAA LNVGVGSGST RGNRRNQSHF GRGRGPRIHQ
201: PRNEFVRLPT QQNGGDVVDR RTYFADIELF NTDSLVKEVS FLFYLLLHIV GDGLHPSTRP IE
001: METQIHQLEQ EAYTAVLRAF KAQSDAISWE KESLITELRK ELRVSDDEHR ELLSRVNKDD TIQRIRDWRQ GGASQITRHA TIQPFDVLPS PTFSAARKKQ
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
101: KTFPSYNPSI GATGNRSFNN RLVSSGISGN ESAEALIGRK VWTKWPEDNH FYEAIITQYN ADEGRHALVY DIHAANETWE WVDLKEIPPE DIRWDGEESG
201: VALNIGHGSA SFRGNRRGQI HGGRGRGPRI HQPRRELVPP PTQQNGSGGR RTSSDDIELF NTDSLVKEVE RVFDSTHPDP LELDKAKKML KEHEQALIAA
301: IARLADTSDG EMDGDPPYSH DHPMPQG
Arabidopsis Description
EML1 [Source:UniProtKB/TrEMBL;Acc:A0A178VB56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.