CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73835	Canola	nucleus	43.75	95.65
Bra001437.1-P	Field mustard	cytoskeleton, cytosol, nucleus	41.9	88.32
CDY50571	Canola	extracellular	39.35	68.91
CDX98955	Canola	cytoskeleton, cytosol, nucleus	30.4	68.81
CDX70068	Canola	cytoskeleton, cytosol, nucleus	26.99	67.38
AT3G12140.3	Thale cress	cytosol	36.51	67.1
CDY42126	Canola	cytosol	24.29	65.27
KRH38126	Soybean	nucleus	28.98	61.26
CDY17848	Canola	cytoskeleton, cytosol, nucleus	9.38	53.66
GSMUA_Achr11P...	Banana	nucleus	17.19	48.21
CDX70488	Canola	nucleus	26.14	47.92
CDX78501	Canola	nucleus	25.85	46.91
CDX85675	Canola	nucleus	25.99	46.8
CDX97218	Canola	nucleus	27.27	46.49
CDX69677	Canola	nucleus	27.27	46.49
KRH71929	Soybean	nucleus	27.7	45.99
Os08t0328300-02	Rice	nucleus	26.56	40.83
OQU89150	Sorghum	nucleus	25.43	39.43
Zm00001d019922_P003	Maize	nucleus	25.28	39.38
Zm00001d005106_P005	Maize	mitochondrion	24.86	37.96
CDY68247	Canola	nucleus	21.31	37.69
HORVU5Hr1G053150.1	Barley	nucleus, plastid	25.28	37.63
TraesCS5A01G173100.1	Wheat	nucleus, plastid	25.14	37.34
TraesCS5D01G177600.1	Wheat	nucleus	25.14	37.34
EES14911	Sorghum	nucleus	24.29	37.25
TraesCS5B01G170500.1	Wheat	nucleus	25.0	37.13
Zm00001d050116_P003	Maize	nucleus	23.86	36.68
Solyc03g063280.2.1	Tomato	nucleus	23.58	36.17
Os09t0279000-01	Rice	mitochondrion	25.57	34.88
CDY17849	Canola	plastid	14.06	33.9
PGSC0003DMT400046911	Potato	cytoskeleton, cytosol, nucleus	6.82	30.38
CDX95603	Canola	nucleus	22.87	28.25
CDX91150	Canola	nucleus	27.27	28.11
CDX83427	Canola	nucleus	19.89	26.37
KXG35268	Sorghum	mitochondrion, nucleus	21.02	23.91
CDY45580	Canola	mitochondrion	10.23	21.56

Protein Annotations

Gene3D:1.10.1240.40	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:ABHD18	InterPro:AB_hydrolase	InterPro:Agenet_dom_plant
EnsemblPlants:CDY00757	ProteinID:CDY00757	ProteinID:CDY00757.1	ncoils:Coil	InterPro:EMSY-LIKE_plant	InterPro:ENT_dom
InterPro:ENT_dom-like_sf	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0050832
EnsemblPlantsGene:GSBRNA2T00110636001	InterPro:IPR005491	InterPro:IPR029058	PFAM:PF03735	PFAM:PF09752	PFscan:PS51138
PANTHER:PTHR33432	PANTHER:PTHR33432:SF7	SMART:SM00743	SMART:SM01191	SUPFAM:SSF158639	SUPFAM:SSF53474
SUPFAM:SSF63748	UniParc:UPI0004EDFFB5	SEG:seg	:	:	:

Description

BnaC03g37410D

Coordinates

chrLK031921:-:1004252..1009896

Molecular Weight (calculated)

78939.3 Da

IEP (calculated)

7.449

GRAVY (calculated)

-0.384

Length

704 amino acids

Sequence
(BLAST)

001: MATRLGTLHY VIDHIYGALM HRTRISPPFF SRGWGGPKLE LLERMAKQLF PMYLEGHNCP PPPLVRPVWR TVWETKTARL REGVFQTPCD DELTAALPPE
101: SRTARVAWLV PKDVPPQKMS CVVHLAGTGD HTYDRRLRLG GPLVKQNIAT MVLESPFYGR RRPFLQRGAR LLCVSDLLLL GRATIEESRS LIHWLDVEEG
201: FGKMGVCGLS MGGVHASMVG SLHPTPVATL PFLSPHSAVV AFCEGILKYG TAWEALREEL AAQKITMTLD EVRERMRTVL SLTDVTRFPV PKNPEAVIFV
301: AATDDGYIPK HSVLALQKAW PGSEVRWVRG GHVSSFILHN DEFRKAIVDG LDRVDWKESC LFVLVKLSFG WPQSCFTKLH SGMEAQIHQL EQEAYTAVLR
401: AFKAQSDAIS WDKESLITEL RKELRVSDDE HRELLSRVNK DDTIQRIRDW RQGGGSQVAS RHAASQGFDV VPSPTFSASR KKQKTFPSYH PSIGPAGNRS
501: FNSRVVSGGI AGDGSAEALI GRKVWTKWPE DNHFYEAIIT QYNAVEGRHA LVYDINAINE TWEWVDLKEI PPEDIRWDGE ESGVTLNAGL GSGSIRGNRI
601: NQSHFGRGRR PRIHQPRREF LPPPTHQNGG GDDIELFNTD LLVKEVERVF DATHPDPFEL GKAKKMLKEH EQALMAAIAR LADTSDGEID GDPPYTHDHA
701: MQQG

Best Arabidopsis Sequence Match ( AT3G12150.1 )
(BLAST)

001: MRTMVTTKLG MLHYVIDHIY GAFMHRTKMT PPFFSRGWGG PNLELLERMV QRLFPLEVQG QNWPPPLVRP VWRTVWETKT ATLREGVFQT PCADELTAAL
101: PPESRTARVA WLVPKNVPPQ KMACVVHLAG TGDHTYDRRL RLGGPLVKQN IATMVLESPF YGQRRPFLQC GARLLCVSDL LLLGRATIEE SRSLIHWLDT
201: EEGFGKMGVC GLSMGGVHAS MVGSLHPTPV ATLPFLSPHS AVVAFCEGIL KYGTAWEALR EELAAQKITM TLDEVRERMR NVLSLTDVTR FPIPKNPDAV
301: IFVAATDDGY IPKHSVLELQ KAWPGSEVRW VTGGHVSSFI LHNDEFRRAI VDGLDRLDWK ESW

Arabidopsis Description

Alpha/beta hydrolase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.